GSIF: Global Soil Information Facilities

Global Soil Information Facilities - tools (standards and functions) and sample datasets for global soil mapping.

AuthorTomislav Hengl [cre, aut], Bas Kempen [ctb], Gerard Heuvelink [ctb], Brendan Malone [ctb]
Date of publication2016-07-22 17:44:27
MaintainerTomislav Hengl <tom.hengl@isric.org>
LicenseGPL
Version0.5-3
http://gsif.r-forge.r-project.org/

View on R-Forge

Man pages

afsp: Africa Soil Profiles Database

as.data.frame: Converts an object of class '"SoilProfileCollection"' to a...

as.geosamples: Converts an object to geosamples class

autopredict: Autopredict numeric or factor type variables

AWCPTF: Available soil water capacity

buffer.dist: Derive buffer distances to a set of points

cookfarm: The Cook Agronomy Farm data set

edgeroi: The Edgeroi Data Set

ERDICM: Effective Rooting Zone depth

extract: Extracts values at points from a list of files

FAO.SoilProfileCollection: A class for FAO SoilProfileCollection

fit.gstatModel: Methods to fit a regression-kriging model

fit.regModel: Fits a regression model to spatial data

fit.vgmModel: Fits a 2D or 3D variogram model to spatial data

geochm: NGS database samples for Indiana State

geosamples: A class for spatially and temporally referenced samples

getID: Derive 1 degree cell IDs

getSpatialTiles: Get a list of tiles (regular blocks)

GlobalSoilMap: A class for GlobalSoilMap soil property maps

GSIF.env: GSIF specific environmental variables / paths

gstatModel: A class for a geostatistical model

isis: ISRIC Soil Information System

landmask: Global coarse resolution land / soil mask maps

LRI: Limiting Rootability

make.3Dgrid: Methods to prepare 3D prediction locations

makeGstatCmd: Make a gstat command script

MaxEnt: Prediction and cross-validation using the Maximum Entropy

merge: Merge multiple predictions

mpspline: Fits a mass preserving spline

OCSKGM: Soil organic carbon stock

predict.gstatModel: Predict from an object of class '"gstatModel"'

REST.SoilGrids: A class for SoilGrids REST API

sample.grid: sample spatial points by grids

soil.classes: Soil classification tables

SoilGrids: A class for SoilGrids - soil property and/or class maps

SoilGrid.validator: Validate SoilGrid (spatial predictions)

soil.legends: Standard color palettes for soil properties and classes

SpatialComponents: A class for gridded components derived using the 'spc' method

SpatialMemberships: A class for membership maps derived using the 'fkmeans'...

spc: Derive Spatial Predictive Components

spfkm: Supervised fuzzy _k_-means on spatial pixels

spline.krige: Kriging combined with splines

spmultinom: Multinomial logistic regression on spatial objects

spsample.prob: Estimate occurrence probabilities of a sampling plan (points)

summary: Summarize an object of class '"SpatialPredictions"'

test.gstatModel: Methods to test predictability of a regression-kriging model

tile: Tiles (subsets or clips) a spatial object to regular blocks

USDA.TT.im: Probability density for texture triangle

warp: (GDAL) warp function from FWTools

WPS: A class for a Web Processing Service

Functions

afsp Man page
as.data.frame Man page
as.data.frame,SoilProfileCollection-method Man page
as.geosamples Man page
as.geosamples,SoilProfileCollection-method Man page
as.geosamples,SpatialPointsDataFrame-method Man page
autopredict Man page
autopredict,SpatialPointsDataFrame,SpatialPixelsDataFrame-method Man page
AWCPTF Man page
buffer.dist Man page
buffer.dist,SpatialPointsDataFrame,SpatialPixelsDataFrame-method Man page
cookfarm Man page
describe Man page
describe,WPS-method Man page
edgeroi Man page
edgeroi.grids Man page
edgeroi.grids100 Man page
ERDICM Man page
extract Man page
extract.list Man page
extract,SpatialPoints,character-method Man page
extract,SpatialPointsDataFrame,character-method Man page
FAO.SoilProfileCollection Man page
FAO.SoilProfileCollection-class Man page
fit.gstatModel Man page
fit.gstatModel,geosamples,formula,list-method Man page
fit.gstatModel,geosamples,formula,SpatialPixelsDataFrame-method Man page
fit.gstatModel,geosamples,list,list-method Man page
fit.gstatModel-method Man page
fit.gstatModel,SpatialPointsDataFrame,formula,SpatialPixelsDataF Man page
fit.regModel Man page
fit.regModel,formula,data.frame,SpatialPixelsDataFrame,character Man page
fit.vgmModel Man page
fit.vgmModel,formula,data.frame,SpatialPixelsDataFrame-method Man page
geochm Man page
geosamples-class Man page
getHorizons Man page
getID Man page
getID,SpatialPolygons-method Man page
getProcess Man page
getProcess,WPS-method Man page
getSpatialTiles Man page
getSpatialTiles,ANY-method Man page
getSpatialTiles,Spatial-method Man page
GlobalSoilMap Man page
GlobalSoilMap-class Man page
GSIF.env Man page
GSIF.opts Man page
gstatModel-class Man page
isis Man page
landmask Man page
landmask20km Man page
LRI Man page
make.3Dgrid Man page
make.3Dgrid,RasterBrick-method Man page
make.3Dgrid,SpatialPixelsDataFrame-method Man page
makeGstatCmd Man page
makePixels Man page
makeSAGAlegend Man page
makeTiles Man page
MaxEnt Man page
MaxEnt,ppp,SpatialPixelsDataFrame-method Man page
merge Man page
merge,RasterBrickSimulations,RasterBrickSimulations-method Man page
merge,SpatialPredictions,SpatialPredictions-method Man page
mpspline Man page
mpspline,SoilProfileCollection-method Man page
munsell Man page
OCSKGM Man page
over,RasterStack,geosamples-method Man page
over,REST.SoilGrids,SpatialPoints-method Man page
over,SpatialPixelsDataFrame,geosamples-method Man page
over,WPS,SpatialPoints-method Man page
plot.gstatModel Man page
plot,gstatModel,ANY-method Man page
predict.gstatModel Man page
predict.gstatModelList Man page
predict,gstatModel-method Man page
predict,list-method Man page
predict,MaxEnt-method Man page
print.gstatModel Man page
resample.grid Man page
REST.SoilGrids Man page
REST.SoilGrids-class Man page
sample.grid Man page
sample.grid.SpatialPoints Man page
sample.grid.SpatialPointsDataFrame Man page
sample.grid,SpatialPointsDataFrame-method Man page
sample.grid,SpatialPoints-method Man page
show,geosamples-method Man page
show,SpatialPredictions-method Man page
show,WPS-method Man page
soil.classes Man page
soil.dom Man page
SoilGrids Man page
SoilGrids-class Man page
SoilGrid.validator Man page
soil.legends Man page
soil.vars Man page
sp3D Man page
sp3D,list-method Man page
sp3D,SpatialPixelsDataFrame-method Man page
SpatialComponents-class Man page
SpatialMemberships-class Man page
spc Man page
spc,list,list-method Man page
spc,SpatialPixelsDataFrame,formula-method Man page
spfkm Man page
spfkm,formula,SpatialPointsDataFrame,SpatialPixelsDataFrame-meth Man page
spline.krige Man page
spmultinom Man page
spmultinom,formula,SpatialPointsDataFrame,SpatialPixelsDataFrame Man page
spsample.prob Man page
spsample.prob,SpatialPoints,SpatialPixelsDataFrame-method Man page
stack,geosamples-method Man page
subset,geosamples-method Man page
subset,WPS-method Man page
summary Man page
summary,SpatialPredictions-method Man page
test.gstatModel Man page
test.gstatModel,geosamples,formula,SpatialPixelsDataFrame-method Man page
test.gstatModel-method Man page
test.gstatModel,SpatialPointsDataFrame,formula,SpatialPixelsData Man page
tile Man page
tile,RasterLayer-method Man page
tile,SpatialLinesDataFrame-method Man page
tile,SpatialPixelsDataFrame-method Man page
tile,SpatialPointsDataFrame-method Man page
tile,SpatialPolygonsDataFrame-method Man page
TT2tri Man page
USDA.TT.im Man page
validate Man page
validate,gstatModel-method Man page
warp Man page
warp,RasterLayer-method Man page
warp,SpatialPixelsDataFrame-method Man page
WPS-class Man page
write.data Man page
write.data.geosamples Man page
write.data,geosamples-method Man page
write.data.SpatialPoints Man page
write.data,SpatialPointsDataFrame-method Man page

Files

DESCRIPTION
NAMESPACE
R
R/AAAA.R R/AWCPTF.R R/LRI.R R/MaxEnt.R R/OCSKGM.R R/RESTSoilGrids.R R/SAGA.R R/SoilGrid.validator.R R/TT2tri.R R/WPSworldgrids.R R/ZZZ.R R/as.data.frame.R R/as.geosamples.R R/autopredict.R R/buffer.dist.R R/extract.list.R R/fit.gstatModel.R R/fit.regModel.R R/fit.vgmModel.R R/fkmeans.R R/getID.R R/gstat.R R/make.3Dgrid.R R/merge.R R/mpspline.R R/predict.gstatModel.R R/sample.grid.R R/spc.R R/spline.krige.R R/spmultinom.R R/spsample.prob.R R/summary.R R/test.gstatModel.R R/tile.R R/validate.R R/warp.R
data
data/USDA.TT.im.rda
data/afsp.rda
data/cookfarm.rda
data/datalist
data/edgeroi.rda
data/geochm.rda
data/isis.rda
data/landmask.rda
data/landmask20km.rda
data/munsell.rda
data/soil.classes.rda
data/soil.dom.rda
data/soil.legends.rda
data/soil.vars.rda
demo
demo/00Index
demo/cookfarm_3DT_RF.R demo/cookfarm_3DT_kriging.R
inst
inst/USDA.csv
inst/WRB.csv
man
man/AWCPTF.Rd man/ERDICM.Rd man/FAO.SoilProfileCollection.Rd man/GSIF.env.Rd man/GlobalSoilMap.Rd man/LRI.Rd man/MaxEnt.Rd man/OCSKGM.Rd man/REST.SoilGrids.Rd man/SoilGrid.validator.Rd man/SoilGrids.Rd man/SpatialComponents.Rd man/SpatialMemberships.Rd man/USDA.TT.im.Rd man/WPS.Rd man/afsp.Rd man/as.data.frame.Rd man/as.geosamples.Rd man/autopredict.Rd man/buffer.dist.Rd man/cookfarm.Rd man/edgeroi.Rd man/extract.Rd man/fit.gstatModel.Rd man/fit.regModel.Rd man/fit.vgmModel.Rd man/geochm.Rd man/geosamples.Rd man/getID.Rd man/getSpatialTiles.Rd man/gstatModel.Rd man/isis.Rd man/landmask.Rd man/make.3Dgrid.Rd man/makeGstatCmd.Rd man/merge.Rd man/mpspline.Rd man/predict.gstatModel.Rd man/sample.grid.Rd man/soil.classes.Rd man/soil.legends.Rd man/spc.Rd man/spfkm.Rd man/spline.krige.Rd man/spmultinom.Rd man/spsample.prob.Rd man/summary.Rd man/test.gstatModel.Rd man/tile.Rd man/warp.Rd

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