HMSC: Hierarchical modelling of species community

This package is design to analyse species community using hierarchical models. The package is based on the work of Ovaskainen and Soininen (2011) and generalize some aspect of the developments made within what was proposed in the paper. The package can perform linear as well as non-linear regression analysis. ** Future: It is meant to include models where species traits and phylogeny can also be considered.

AuthorF. Guillaume Blanchet
Date of publication2014-07-17 14:02:20
MaintainerF. Guillaume Blanchet <>
LicenseGPL (>=2)

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as.HMSCdata Man page
as.HMSCparam Man page
as.HMSCprior Man page
basicStatHMSC Man page
communitySimulH Man page
communitySimulH.default Man page
communitySimulH.formula Man page
communitySimulHT Man page
communitySimulHT.default Man page
erf Man page
erfc Man page
g Man page
HMSC Man page
hmscH Man page
hmscH.formula Man page
hmscH.HMSCdata Man page
hmscHT Man page
hmscHT.HMSCdata Man page
HMSC-package Man page
ilog Man page
ilogit Man page
inverf Man page
inverfc Man page
loglikelihood Man page
loglikelihood.default Man page
loglikelihood.formula Man page
loglikelihood.matrix Man page
mixing Man page
plot.communitySimul Man page
quantile.hmsc Man page
scamH Man page
scamH.formula Man page
scamH.HMSCdata Man page
scamHT Man page
scamHT.HMSCdata Man page
scamRandom Man page
scamRandom.HMSCdata Man page
summary.hmsc Man page

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