Order-Restricted Inference for Microarray Experiments

dopamine | Dose-response microarray example data |

exampleData | Dose-response microarray example data |

Isoallfdr | Obtaining the delta table in the SAM procedure |

IsoBHPlot | Plot of adjusted p-values using BH or BY adjustment |

Isofudge | Calculation of the fudge factor for the five SAM test... |

IsoGene1 | The five test statistics calculated for both the increasing... |

IsoGenem | The five test statistics calculated for both the increasing... |

IsoGenemSAM | The five SAM test statistics calculated for both the... |

IsoGene.package | IsoGene |

IsomaxT | The maxT procedure for order restricted inference |

IsoPlot | IsoPlot |

IsopvaluePlot | Plot of p-values from permutations under increasing or... |

Isoqqstat | Implementation of five SAM test statistics in the SAM... |

Isoqval | Obtaining the list of significant genes using the SAM... |

IsoRawp | IsoRawp |

IsoSAMPlot | Plots produced using the SAM procedure |

IsoTestBH | Test of monotonic trends using the five test statistics with... |

IsoTestSAM | Obtaining the list of significant genes using the SAM... |

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