MPAlars: lars algorithm

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This package contains an implementation of the lars algorithm [1], for the lasso and fusion penalization. It works even if the number of covariate is greater than the number of individuals. It has been designed for Multi Patients Analysis (MPA) of genomic markers. Its main purpose is the analysis of copy number signal but it can be used for other context

Author
Quentin Grimonprez
Date of publication
2013-06-11 08:30:34
Maintainer
Quentin Grimonprez <quentin.grimonprez@inria.fr>
License
GPL (>= 2)
Version
1.0

View on R-Forge

Man pages

computeCoefficients
Compute coefficients
LarsPath-class
Constructor of LarsPath class
MPA.coef
get coefficients at a given step.
MPA.cvlars
cross validation
MPA.fusion
Fusion algorithm
MPA.lars
Lars algorithm
MPA-package
Lars algorithm
MPA.simul
Simulate copy number data for a case-control study.
plot.coefficient
Plot of coefficients
plot.cv
plot cross validation mean square error
plot-methods
plot methods for LarsPath object
predict
Prediction of response

Files in this package

MPAlars/DESCRIPTION
MPAlars/NAMESPACE
MPAlars/R
MPAlars/R/LarsPath.R
MPAlars/R/cvlars.R
MPAlars/R/lars.R
MPAlars/R/predict.R
MPAlars/R/simulation.R
MPAlars/man
MPAlars/man/LarsPath-class.Rd
MPAlars/man/MPA-package.Rd
MPAlars/man/MPA.coef.Rd
MPAlars/man/MPA.cvlars.Rd
MPAlars/man/MPA.fusion.Rd
MPAlars/man/MPA.lars.Rd
MPAlars/man/MPA.simul.Rd
MPAlars/man/computeCoefficients.Rd
MPAlars/man/plot-methods.Rd
MPAlars/man/plot.coefficient.Rd
MPAlars/man/plot.cv.Rd
MPAlars/man/predict.Rd
MPAlars/src
MPAlars/src/Makevars
MPAlars/src/Makevars.win
MPAlars/src/fusion
MPAlars/src/fusion/Fusion.cpp
MPAlars/src/fusion/Fusion.h
MPAlars/src/fusion/fusion.mk
MPAlars/src/lars
MPAlars/src/lars/Cvlars.cpp
MPAlars/src/lars/Cvlars.h
MPAlars/src/lars/Lars.cpp
MPAlars/src/lars/Lars.h
MPAlars/src/lars/Path.cpp
MPAlars/src/lars/Path.h
MPAlars/src/lars/PathState.cpp
MPAlars/src/lars/PathState.h
MPAlars/src/lars/functions.cpp
MPAlars/src/lars/functions.h
MPAlars/src/lars/lars.mk
MPAlars/src/larsR.cpp
MPAlars/src/larsR.h
MPAlars/src/stkpp
MPAlars/src/stkpp/AUTHORS
MPAlars/src/stkpp/CMakeLists.txt
MPAlars/src/stkpp/COPYING
MPAlars/src/stkpp/COPYRIGHTS
MPAlars/src/stkpp/Doxyfile
MPAlars/src/stkpp/INSTALL
MPAlars/src/stkpp/bin
MPAlars/src/stkpp/bin/empty
MPAlars/src/stkpp/configure
MPAlars/src/stkpp/doc
MPAlars/src/stkpp/doc/Doxylog
MPAlars/src/stkpp/doc/tutorial
MPAlars/src/stkpp/doc/tutorial/makefile
MPAlars/src/stkpp/doc/tutorial/tutoAccessors.cpp
MPAlars/src/stkpp/doc/tutorial/tutoAccessors.out
MPAlars/src/stkpp/doc/tutorial/tutoConstructors.cpp
MPAlars/src/stkpp/doc/tutorial/tutoConstructors.out
MPAlars/src/stkpp/doc/tutorial/tutoReference.cpp
MPAlars/src/stkpp/doc/tutorial/tutoReference.out
MPAlars/src/stkpp/doc/tutorial/tutoSubArrays.cpp
MPAlars/src/stkpp/doc/tutorial/tutoSubArrays.out
MPAlars/src/stkpp/doc/tutorial/tuto_01.h
MPAlars/src/stkpp/doc/tutorial/tuto_02.h
MPAlars/src/stkpp/doc/tutorial/tuto_03.h
MPAlars/src/stkpp/gui
MPAlars/src/stkpp/gui/empty
MPAlars/src/stkpp/gui/model
MPAlars/src/stkpp/gui/model/bin
MPAlars/src/stkpp/gui/model/bin/empty
MPAlars/src/stkpp/gui/model/include
MPAlars/src/stkpp/gui/model/include/STK_Category.h
MPAlars/src/stkpp/gui/model/include/STK_Connection.h
MPAlars/src/stkpp/gui/model/include/STK_GProgram.h
MPAlars/src/stkpp/gui/model/include/STK_IPropertySource.h
MPAlars/src/stkpp/gui/model/include/STK_IStep.h
MPAlars/src/stkpp/gui/model/include/STK_PropertyDescriptor.h
MPAlars/src/stkpp/gui/model/include/STK_Tool.h
MPAlars/src/stkpp/gui/model/include/model.h
MPAlars/src/stkpp/gui/model/src
MPAlars/src/stkpp/gui/model/src/STK_Category.cpp
MPAlars/src/stkpp/gui/model/src/STK_Connection.cpp
MPAlars/src/stkpp/gui/model/src/STK_GProgram.cpp
MPAlars/src/stkpp/gui/model/src/STK_IPropertySource.cpp
MPAlars/src/stkpp/gui/model/src/STK_IStep.cpp
MPAlars/src/stkpp/gui/model/src/STK_PropertyDescriptor.cpp
MPAlars/src/stkpp/gui/model/src/STK_Tool.cpp
MPAlars/src/stkpp/gui/model/src/makefile
MPAlars/src/stkpp/gui/model/src/testGProgram.cpp
MPAlars/src/stkpp/include
MPAlars/src/stkpp/include/AAModels.h
MPAlars/src/stkpp/include/Algebra.h
MPAlars/src/stkpp/include/Analysis.h
MPAlars/src/stkpp/include/Arrays.h
MPAlars/src/stkpp/include/DManager.h
MPAlars/src/stkpp/include/Reduct.h
MPAlars/src/stkpp/include/Regress.h
MPAlars/src/stkpp/include/Rmath.h
MPAlars/src/stkpp/include/STKernel.h
MPAlars/src/stkpp/include/STKpp.h
MPAlars/src/stkpp/include/STatistiK.h
MPAlars/src/stkpp/include/Sdk.h
MPAlars/src/stkpp/include/StatModels.h
MPAlars/src/stkpp/lib
MPAlars/src/stkpp/lib/empty
MPAlars/src/stkpp/makefile
MPAlars/src/stkpp/makevars
MPAlars/src/stkpp/programs
MPAlars/src/stkpp/programs/Contiguity
MPAlars/src/stkpp/programs/Contiguity/bin
MPAlars/src/stkpp/programs/Contiguity/bin/empty
MPAlars/src/stkpp/programs/Contiguity/data
MPAlars/src/stkpp/programs/Contiguity/data/example.opt
MPAlars/src/stkpp/programs/Contiguity/data/out.csv
MPAlars/src/stkpp/programs/Contiguity/data/simul.csv
MPAlars/src/stkpp/programs/Contiguity/data/simulManifold.R
MPAlars/src/stkpp/programs/Contiguity/src
MPAlars/src/stkpp/programs/Contiguity/src/ContigPage.cpp
MPAlars/src/stkpp/programs/Contiguity/src/ContigPage.h
MPAlars/src/stkpp/programs/Contiguity/src/contiguity.cpp
MPAlars/src/stkpp/programs/Contiguity/src/makefile
MPAlars/src/stkpp/programs/MixBin
MPAlars/src/stkpp/programs/MixBin/bin
MPAlars/src/stkpp/programs/MixBin/bin/empty
MPAlars/src/stkpp/programs/MixBin/data
MPAlars/src/stkpp/programs/MixBin/data/Index
MPAlars/src/stkpp/programs/MixBin/data/house-votes-84.data
MPAlars/src/stkpp/programs/MixBin/data/house-votes-84.names
MPAlars/src/stkpp/programs/MixBin/data/house-votes-84.opt
MPAlars/src/stkpp/programs/MixBin/src
MPAlars/src/stkpp/programs/MixBin/src/MixBinPage.cpp
MPAlars/src/stkpp/programs/MixBin/src/MixBinPage.h
MPAlars/src/stkpp/programs/MixBin/src/makefile
MPAlars/src/stkpp/programs/MixBin/src/mixbin.cpp
MPAlars/src/stkpp/programs/empty
MPAlars/src/stkpp/projects
MPAlars/src/stkpp/projects/AAModels
MPAlars/src/stkpp/projects/AAModels/CMakeLists.txt
MPAlars/src/stkpp/projects/AAModels/include
MPAlars/src/stkpp/projects/AAModels/include/STK_GaussianAAModel.h
MPAlars/src/stkpp/projects/AAModels/include/STK_IAAModel.h
MPAlars/src/stkpp/projects/AAModels/include/STK_LinearAAModel.h
MPAlars/src/stkpp/projects/AAModels/src
MPAlars/src/stkpp/projects/AAModels/src/STK_GaussianAAModel.cpp
MPAlars/src/stkpp/projects/AAModels/src/STK_IAAModel.cpp
MPAlars/src/stkpp/projects/AAModels/src/STK_LinearAAModel.cpp
MPAlars/src/stkpp/projects/AAModels/src/makefile
MPAlars/src/stkpp/projects/Algebra
MPAlars/src/stkpp/projects/Algebra/CMakeLists.txt
MPAlars/src/stkpp/projects/Algebra/include
MPAlars/src/stkpp/projects/Algebra/include/STK_EigenvaluesSymmetric.h
MPAlars/src/stkpp/projects/Algebra/include/STK_GinvSymmetric.h
MPAlars/src/stkpp/projects/Algebra/include/STK_Givens.h
MPAlars/src/stkpp/projects/Algebra/include/STK_GramSchmidt.h
MPAlars/src/stkpp/projects/Algebra/include/STK_Householder.h
MPAlars/src/stkpp/projects/Algebra/include/STK_LinAlgebra1D.h
MPAlars/src/stkpp/projects/Algebra/include/STK_LinAlgebra2D.h
MPAlars/src/stkpp/projects/Algebra/include/STK_Qr.h
MPAlars/src/stkpp/projects/Algebra/include/STK_Svd.h
MPAlars/src/stkpp/projects/Algebra/src
MPAlars/src/stkpp/projects/Algebra/src/STK_EigenvaluesSymmetric.cpp
MPAlars/src/stkpp/projects/Algebra/src/STK_Givens.cpp
MPAlars/src/stkpp/projects/Algebra/src/STK_Qr.cpp
MPAlars/src/stkpp/projects/Algebra/src/STK_Svd.cpp
MPAlars/src/stkpp/projects/Algebra/src/makefile
MPAlars/src/stkpp/projects/Analysis
MPAlars/src/stkpp/projects/Analysis/CMakeLists.txt
MPAlars/src/stkpp/projects/Analysis/bc
MPAlars/src/stkpp/projects/Analysis/bc/fact.bc
MPAlars/src/stkpp/projects/Analysis/bc/facthalf.bc
MPAlars/src/stkpp/projects/Analysis/bc/incompteBetaRatio.bc
MPAlars/src/stkpp/projects/Analysis/bc/lnGamma.bc
MPAlars/src/stkpp/projects/Analysis/bc/ln_stirl_error.bc
MPAlars/src/stkpp/projects/Analysis/include
MPAlars/src/stkpp/projects/Analysis/include/STK_Algo.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Const_Math.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_betaRatio.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_gamma.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_gammaRatio.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_poisson_raw.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_raw.h
MPAlars/src/stkpp/projects/Analysis/include/STK_Funct_util.h
MPAlars/src/stkpp/projects/Analysis/include/STK_ISerie.h
MPAlars/src/stkpp/projects/Analysis/src
MPAlars/src/stkpp/projects/Analysis/src/STK_Const_Math.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_betaRatio.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_dev0.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_erf_raw.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_expm1.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_g0.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_gamma.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_gammaRatio.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_log1p.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_normal_raw.cpp
MPAlars/src/stkpp/projects/Analysis/src/STK_Funct_poisson_raw.cpp
MPAlars/src/stkpp/projects/Analysis/src/makefile
MPAlars/src/stkpp/projects/Arrays
MPAlars/src/stkpp/projects/Arrays/CMakeLists.txt
MPAlars/src/stkpp/projects/Arrays/include
MPAlars/src/stkpp/projects/Arrays/include/STK_AllocatorBase.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array1D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DDiagonal.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DFunctors.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DLowerTriangular.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DPoint.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DSquare.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DUpperTriangular.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Array2DVector.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ArrayBase.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ArrayBaseAssign.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ArrayBaseInitializer.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ArrayBaseProduct.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ArrayBaseVisitor.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Arrays_Util.h
MPAlars/src/stkpp/projects/Arrays/include/STK_CAllocator.h
MPAlars/src/stkpp/projects/Arrays/include/STK_CArray.h
MPAlars/src/stkpp/projects/Arrays/include/STK_Display.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IArray1D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IArray2D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IArray2DBase.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ICArray.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IContainer1D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IContainer2D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_IContainerRef.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ITContainer.h
MPAlars/src/stkpp/projects/Arrays/include/STK_ITContainer1D.h
MPAlars/src/stkpp/projects/Arrays/include/STK_PtrCopycat.h
MPAlars/src/stkpp/projects/Arrays/include/operators
MPAlars/src/stkpp/projects/Arrays/include/operators/STK_BinaryOperators.h
MPAlars/src/stkpp/projects/Arrays/include/operators/STK_DotOperators.h
MPAlars/src/stkpp/projects/Arrays/include/operators/STK_ProductOperators.h
MPAlars/src/stkpp/projects/Arrays/include/operators/STK_UnaryOperators.h
MPAlars/src/stkpp/projects/Arrays/include/product
MPAlars/src/stkpp/projects/Arrays/include/product/STK_GeneralByGeneralProduct.h
MPAlars/src/stkpp/projects/Arrays/include/product/STK_GeneralByVectorProduct.h
MPAlars/src/stkpp/projects/Arrays/include/product/STK_ProductImpl.h
MPAlars/src/stkpp/projects/Arrays/src
MPAlars/src/stkpp/projects/Arrays/src/STK_Arrays_Util.cpp
MPAlars/src/stkpp/projects/Arrays/src/makefile
MPAlars/src/stkpp/projects/CMakeLists.txt
MPAlars/src/stkpp/projects/DManager
MPAlars/src/stkpp/projects/DManager/CMakeLists.txt
MPAlars/src/stkpp/projects/DManager/include
MPAlars/src/stkpp/projects/DManager/include/STK_Cell.h
MPAlars/src/stkpp/projects/DManager/include/STK_CsvToArray.h
MPAlars/src/stkpp/projects/DManager/include/STK_DManager_Util.h
MPAlars/src/stkpp/projects/DManager/include/STK_DataFrame.h
MPAlars/src/stkpp/projects/DManager/include/STK_DataFrameToArray2D.h
MPAlars/src/stkpp/projects/DManager/include/STK_ExportToCsv.h
MPAlars/src/stkpp/projects/DManager/include/STK_HeapSort.h
MPAlars/src/stkpp/projects/DManager/include/STK_IPage.h
MPAlars/src/stkpp/projects/DManager/include/STK_IVariable.h
MPAlars/src/stkpp/projects/DManager/include/STK_ImportFromCsv.h
MPAlars/src/stkpp/projects/DManager/include/STK_Import_Util.h
MPAlars/src/stkpp/projects/DManager/include/STK_List1D.h
MPAlars/src/stkpp/projects/DManager/include/STK_Option.h
MPAlars/src/stkpp/projects/DManager/include/STK_ReadWriteCsv.h
MPAlars/src/stkpp/projects/DManager/include/STK_ReadWritePages.h
MPAlars/src/stkpp/projects/DManager/include/STK_Variable.h
MPAlars/src/stkpp/projects/DManager/src
MPAlars/src/stkpp/projects/DManager/src/STK_DManager_Util.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_DataFrame.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_ExportToCsv.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_IPage.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_ImportFromCsv.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_Import_Util.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_Option.cpp
MPAlars/src/stkpp/projects/DManager/src/STK_ReadWritePages.cpp
MPAlars/src/stkpp/projects/DManager/src/makefile
MPAlars/src/stkpp/projects/Reduct
MPAlars/src/stkpp/projects/Reduct/CMakeLists.txt
MPAlars/src/stkpp/projects/Reduct/include
MPAlars/src/stkpp/projects/Reduct/include/STK_ILinearReduct.h
MPAlars/src/stkpp/projects/Reduct/include/STK_IReduct.h
MPAlars/src/stkpp/projects/Reduct/include/STK_LocalVariance.h
MPAlars/src/stkpp/projects/Reduct/include/STK_LocalVariancePage.h
MPAlars/src/stkpp/projects/Reduct/include/STK_ProjectedVariance.h
MPAlars/src/stkpp/projects/Reduct/include/STK_Reduct_Util.h
MPAlars/src/stkpp/projects/Reduct/src
MPAlars/src/stkpp/projects/Reduct/src/CMakeLists.txt
MPAlars/src/stkpp/projects/Reduct/src/STK_ILinearReduct.cpp
MPAlars/src/stkpp/projects/Reduct/src/STK_IReduct.cpp
MPAlars/src/stkpp/projects/Reduct/src/STK_LocalVariance.cpp
MPAlars/src/stkpp/projects/Reduct/src/STK_LocalVariancePage.cpp
MPAlars/src/stkpp/projects/Reduct/src/STK_ProjectedVariance.cpp
MPAlars/src/stkpp/projects/Reduct/src/STK_Reduct_Util.cpp
MPAlars/src/stkpp/projects/Reduct/src/makefile
MPAlars/src/stkpp/projects/Regress
MPAlars/src/stkpp/projects/Regress/CMakeLists.txt
MPAlars/src/stkpp/projects/Regress/include
MPAlars/src/stkpp/projects/Regress/include/STK_AdditiveBSplineCoefficients.h
MPAlars/src/stkpp/projects/Regress/include/STK_AdditiveBSplineRegression.h
MPAlars/src/stkpp/projects/Regress/include/STK_AdditiveBSplineRegressionPage.h
MPAlars/src/stkpp/projects/Regress/include/STK_BSplineCoefficients.h
MPAlars/src/stkpp/projects/Regress/include/STK_BSplineRegression.h
MPAlars/src/stkpp/projects/Regress/include/STK_IRegression.h
MPAlars/src/stkpp/projects/Regress/include/STK_MultidimRegression.h
MPAlars/src/stkpp/projects/Regress/include/STK_Regress_Util.h
MPAlars/src/stkpp/projects/Regress/src
MPAlars/src/stkpp/projects/Regress/src/CMakeLists.txt
MPAlars/src/stkpp/projects/Regress/src/STK_AdditiveBSplineCoefficients.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_AdditiveBSplineRegression.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_AdditiveBSplineRegressionPage.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_BSplineCoefficients.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_BSplineRegression.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_MultidimRegression.cpp
MPAlars/src/stkpp/projects/Regress/src/STK_Regress_Util.cpp
MPAlars/src/stkpp/projects/Regress/src/makefile
MPAlars/src/stkpp/projects/STKernel
MPAlars/src/stkpp/projects/STKernel/CMakeLists.txt
MPAlars/src/stkpp/projects/STKernel/include
MPAlars/src/stkpp/projects/STKernel/include/STK_Arithmetic.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Binary.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Char.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Chrono.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Constants.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Exceptions.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Functors.h
MPAlars/src/stkpp/projects/STKernel/include/STK_IdTypeImpl.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Integer.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Macros.h
MPAlars/src/stkpp/projects/STKernel/include/STK_MetaTemplate.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Misc.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Proxy.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Range.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Real.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Sign.h
MPAlars/src/stkpp/projects/STKernel/include/STK_StaticAssert.h
MPAlars/src/stkpp/projects/STKernel/include/STK_Stream.h
MPAlars/src/stkpp/projects/STKernel/include/STK_String.h
MPAlars/src/stkpp/projects/STKernel/include/STK_String_Util.h
MPAlars/src/stkpp/projects/STKernel/include/STK_TypeBase.h
MPAlars/src/stkpp/projects/STKernel/src
MPAlars/src/stkpp/projects/STKernel/src/CMakeLists.txt
MPAlars/src/stkpp/projects/STKernel/src/STK_Binary.cpp
MPAlars/src/stkpp/projects/STKernel/src/STK_Chrono.cpp
MPAlars/src/stkpp/projects/STKernel/src/STK_Exceptions.cpp
MPAlars/src/stkpp/projects/STKernel/src/STK_Range.cpp
MPAlars/src/stkpp/projects/STKernel/src/STK_Sign.cpp
MPAlars/src/stkpp/projects/STKernel/src/STK_String_Util.cpp
MPAlars/src/stkpp/projects/STKernel/src/makefile
MPAlars/src/stkpp/projects/STatistiK
MPAlars/src/stkpp/projects/STatistiK/CMakeLists.txt
MPAlars/src/stkpp/projects/STatistiK/include
MPAlars/src/stkpp/projects/STatistiK/include/MersenneTwister.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Bernoulli.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Beta.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Cauchy.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Exponential.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Gamma.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_ILawBase.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_IMultiLaw.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_IUnivLaw.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_JointBernoulli.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_JointCauchy.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_JointNormal.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_MultiNormal.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Law_Normal.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_RandBase.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_Bivariate.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_BivariateRealReal.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_Multivariate.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_MultivariateReal.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_Transform.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_Univariate.h
MPAlars/src/stkpp/projects/STatistiK/include/STK_Stat_UnivariateReal.h
MPAlars/src/stkpp/projects/STatistiK/src
MPAlars/src/stkpp/projects/STatistiK/src/STK_Exponential.cpp
MPAlars/src/stkpp/projects/STatistiK/src/STK_Law_Bernoulli.cpp
MPAlars/src/stkpp/projects/STatistiK/src/STK_Law_Cauchy.cpp
MPAlars/src/stkpp/projects/STatistiK/src/STK_Law_Normal.cpp
MPAlars/src/stkpp/projects/STatistiK/src/STK_RandBase.cpp
MPAlars/src/stkpp/projects/STatistiK/src/makefile
MPAlars/src/stkpp/projects/Sdk
MPAlars/src/stkpp/projects/Sdk/include
MPAlars/src/stkpp/projects/Sdk/include/STK_IRecursiveTemplate.h
MPAlars/src/stkpp/projects/Sdk/include/STK_IRunner.h
MPAlars/src/stkpp/projects/Sdk/include/STK_Traits.h
MPAlars/src/stkpp/projects/Sdk/src
MPAlars/src/stkpp/projects/Sdk/src/makefile
MPAlars/src/stkpp/projects/StatModels
MPAlars/src/stkpp/projects/StatModels/CMakeLists.txt
MPAlars/src/stkpp/projects/StatModels/include
MPAlars/src/stkpp/projects/StatModels/include/STK_AICCriterion.h
MPAlars/src/stkpp/projects/StatModels/include/STK_BICCriterion.h
MPAlars/src/stkpp/projects/StatModels/include/STK_BernoulliModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_Gaussian2BlocksModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_GaussianModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_ICriterion.h
MPAlars/src/stkpp/projects/StatModels/include/STK_IGaussianModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_ILatentModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_IModelBase.h
MPAlars/src/stkpp/projects/StatModels/include/STK_IMultiStatModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_IUnivStatModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_JointBernoulliModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_JointGaussianModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_LatentModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_MixtureModel.h
MPAlars/src/stkpp/projects/StatModels/include/STK_Model_Util.h
MPAlars/src/stkpp/projects/StatModels/include/STK_StatisticalModel.h
MPAlars/src/stkpp/projects/StatModels/src
MPAlars/src/stkpp/projects/StatModels/src/CMakeLists.txt
MPAlars/src/stkpp/projects/StatModels/src/STK_AICCriterion.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_BICCriterion.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_Gaussian2BlocksModel.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_GaussianModel.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_ICriterion.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_IGaussianModel.cpp
MPAlars/src/stkpp/projects/StatModels/src/STK_Model_Util.cpp
MPAlars/src/stkpp/projects/StatModels/src/makefile
MPAlars/src/stkpp/tests
MPAlars/src/stkpp/tests/Algebra
MPAlars/src/stkpp/tests/Algebra/CMakeLists.txt
MPAlars/src/stkpp/tests/Algebra/makefile
MPAlars/src/stkpp/tests/Algebra/testEigenvalues.cpp
MPAlars/src/stkpp/tests/Algebra/testQr.cpp
MPAlars/src/stkpp/tests/Algebra/testSvd.cpp
MPAlars/src/stkpp/tests/Analysis
MPAlars/src/stkpp/tests/Analysis/CMakeLists.txt
MPAlars/src/stkpp/tests/Analysis/makefile
MPAlars/src/stkpp/tests/Analysis/testAnalysis.cpp
MPAlars/src/stkpp/tests/Arrays
MPAlars/src/stkpp/tests/Arrays/CMakeLists.txt
MPAlars/src/stkpp/tests/Arrays/makefile
MPAlars/src/stkpp/tests/Arrays/testArray1D.cpp
MPAlars/src/stkpp/tests/Arrays/testArray2D.cpp
MPAlars/src/stkpp/tests/Arrays/testBinaryOperators.cpp
MPAlars/src/stkpp/tests/Arrays/testCAllocator.cpp
MPAlars/src/stkpp/tests/Arrays/testCArrayAssign.cpp
MPAlars/src/stkpp/tests/Arrays/testCArrays.cpp
MPAlars/src/stkpp/tests/Arrays/testProducts.cpp
MPAlars/src/stkpp/tests/Arrays/testUnaryOperators.cpp
MPAlars/src/stkpp/tests/CMakeLists.txt
MPAlars/src/stkpp/tests/DManager
MPAlars/src/stkpp/tests/DManager/CMakeLists.txt
MPAlars/src/stkpp/tests/DManager/makefile
MPAlars/src/stkpp/tests/DManager/testCsv.cpp
MPAlars/src/stkpp/tests/DManager/testHeapSort.cpp
MPAlars/src/stkpp/tests/DManager/testList1D.cpp
MPAlars/src/stkpp/tests/DManager/testPages.cpp
MPAlars/src/stkpp/tests/StatModels
MPAlars/src/stkpp/tests/StatModels/CMakeLists.txt
MPAlars/src/stkpp/tests/StatModels/makefile
MPAlars/src/stkpp/tests/StatModels/testJointModels.cpp
MPAlars/src/stkpp/tests/data
MPAlars/src/stkpp/tests/data/csv.test
MPAlars/src/stkpp/tests/data/options.test
MPAlars/src/stkpp/tests/data/tdf.csv
MPAlars/src/stkpp/tests/data/vin.csv
MPAlars/src/stkpp/tests/makefile
MPAlars/src/stkpp/tests/testAALin.cpp
MPAlars/src/stkpp/tests/testBSpline.cpp
MPAlars/src/stkpp/tests/testBase.cpp
MPAlars/src/stkpp/tests/testFunctors.cpp
MPAlars/src/stkpp/tests/testNormalLaw.cpp
MPAlars/src/stkpp/tests/testStat.cpp