ProbeAnnotator: Faste Gene Annotation in R
Version 0.99.1

This package provides fast and user friendly wrappers to C++ functions for gene annotation.

AuthorAlexandre Thiery, Pierre Bady
Date of publication2015-03-28 18:15:00
MaintainerAlexandre Thiery <alexandre.thiery@unil.ch>
LicenseGPL (>= 2)
Version0.99.1
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("ProbeAnnotator", repos="http://R-Forge.R-project.org")

Getting started

Package overview

Popular man pages

annotateBy: Fast Gene Annotation by Alignment or Chromosomal Location
annotateGetInfoFromOrganismtDb: Get gene information using EntrezID and OrganismDb
annotateGetRefFromTranscriptDb: Get mapping between reference and gene using TranscriptDb
ProbeAnnotator-package: ProbeAnnotator package
searchGene: Search a "gene" contained in a character vector
See all...

All man pages Function index File listing

Man pages

annotateBy: Fast Gene Annotation by Alignment or Chromosomal Location
annotateGetInfoFromOrganismtDb: Get gene information using EntrezID and OrganismDb
annotateGetRefFromTranscriptDb: Get mapping between reference and gene using TranscriptDb
ProbeAnnotator-package: ProbeAnnotator package
searchGene: Search a "gene" contained in a character vector

Functions

ProbeAnnotator Man page
ProbeAnnotator-package Man page
annotateByAlignment Man page Source code
annotateByLocation Man page Source code
annotateGetInfoFromOrganismtDb Man page Source code
annotateGetRefFromTranscriptDb Man page Source code
checkVector Source code
searchGene Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/ProbeAnnotator.R
R/annotateByAlignment.R
R/annotateByLocation.R
R/annotateGetInfoFromOrganismDb.R
R/annotateGetRefFromTranscriptDb.R
R/checkVector.R
R/searchGene.R
man
man/ProbeAnnotator-package.Rd
man/annotateBy.Rd
man/annotateGetInfoFromOrganismtDb.Rd
man/annotateGetRefFromTranscriptDb.Rd
man/searchGene.Rd
src
src/annotatorClass.h
src/byAlignment.cpp
src/byLocation.cpp
src/exports.cpp
src/structs.h
ProbeAnnotator documentation built on May 21, 2017, 2:31 a.m.

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