Man pages for REddyProc
Data processing and plotting utilities of (half-)hourly eddy-covariance measurements
| applyWindows | applyWindows |
| BerkeleyJulianDateToPOSIXct | BerkeleyJulianDateToPOSIXct |
| DEGebExample | Eddy covariance data from Gebesee crop site, Germany |
| Example_DETha98 | Eddy covariance data from Tharandt, Germany |
| fAddNCFVar | fAddNCFVar |
| fCalcAVPfromVMFandPress | fCalcAVPfromVMFandPress |
| fCalcETfromLE | fCalcETfromLE |
| fCalcExtRadiation | fCalcExtRadiation |
| fCalcLengthOfGaps | fCalcLengthOfGaps |
| fCalcPotRadiation | fCalcPotRadiation |
| fCalcRHfromAVPandTair | fCalcRHfromAVPandTair |
| fCalcSunPosition | fCalcSunPosition |
| fCalcSVPfromTair | fCalcSVPfromTair |
| fCalcVPDfromRHandTair | fCalcVPDfromRHandTair |
| fCheckColNames | fCheckColNames |
| fCheckColNum | fCheckColNum |
| fCheckColPlausibility | fCheckColPlausibility |
| fCheckHHTimeSeries | fCheckHHTimeSeries |
| fCheckOutsideRange | fCheckOutsideRange |
| fCheckValNum | fCheckValNum |
| fCheckValString | fCheckValString |
| fConvertCtoK | fConvertCtoK |
| fConvertGapsToNA | fConvertGapsToNA |
| fConvertGlobalToVisible | fConvertGlobalToVisible |
| fConvertKtoC | fConvertKtoC |
| fConvertNAsToGap | fConvertNAsToGap |
| fConvertTimeToPosix | Convert different time formats to POSIX |
| fConvertVisibleWm2toPhotons | fConvertVisibleWm2toPhotons |
| fExpandToFullYear | fExpandToFullYear |
| fFilterAttr | fFilterAttr |
| fFullYearTimeSteps | fFullYearTimeSteps |
| fGetBeginOfEddyPeriod | fGetBeginOfEddyPeriod |
| fGetEndOfEddyPeriod | fGetEndOfEddyPeriod |
| fGetYearOfEddyPeriod | fGetYearOfEddyPeriod |
| fillNAForward | fillNAForward |
| fInitFilesDir | fInitFilesDir |
| fInterpolateGaps | fInterpolateGaps |
| fLloydTaylor | Temperature dependence of soil respiration |
| fLoadEuroFlux16 | fLoadEuroFlux16 |
| fLoadFluxNCInfo | Get site information from BGI NetCDF files |
| fLoadFluxNCIntoDataframe | Load NetCDF file |
| fLoadTXTIntoDataframe | Load text file with one header and one unit row into data... |
| fOptimSingleE0 | Estimate temperature sensitivity E_0 using a Newton type... |
| fOptimSingleE0_Lev | Estimate temperature sensitivity E_0 using Levenberg-Marquard... |
| fReadTimeBerkeley | fReadTimeBerkeley |
| fReadTimeSeveralCols | fReadTimeSeveralCols |
| fRegrE0fromShortTerm | Estimation of the temperature sensitivity E_0 |
| fSetFile | fSetFile |
| fSetQF | Check and set quality flag |
| fStripFileExtension | fStripFileExtension |
| fWriteDataframeToFile | fWriteDataframeToFile |
| getAmerifluxToBGC05VariableNameMapping | getAmerifluxToBGC05VariableNameMapping |
| getBGC05ToAmerifluxVariableNameMapping | getBGC05ToAmerifluxVariableNameMapping |
| isValidNightRecord | isValidNightRecord |
| parmGLOptimLRCBounds | parmGLOptimLRCBounds |
| partGLBoundParameters | partGLBoundParameters |
| partGLControl | partGLControl |
| partGLEstimateTempSensInBoundsE0Only | partGLEstimateTempSensInBoundsE0Only |
| partGLFitLRC | partGLFitLRC |
| partGLFitLRCOneWindow | partGLFitLRCOneWindow |
| partGLFitLRCWindows | partGLFitLRCWindows |
| partGLFitNightRespRefOneWindow | partGLFitNightRespRefOneWindow |
| partGLFitNightTempSensOneWindow | partGLFitNightTempSensOneWindow |
| partGLInterpolateFluxes | partGLInterpolateFluxes |
| partGL_RHLightResponse | partGL RHLightResponse |
| partGL_RHLightResponseGrad | partGL RHLightResponseGrad |
| partGLSmoothTempSens | partGLSmoothTempSens |
| partitionNEEGL | partitionNEEGL |
| POSIXctToBerkeleyJulianDate | POSIXctToBerkeleyJulianDate |
| REddyProc-package | Data processing and plotting utilities of (half-)hourly... |
| renameVariablesInDataframe | renameVariablesInDataframe |
| RHLightResponseCostC | RHLightResponseCostC |
| sCalcPotRadiation | sCalcPotRadiation |
| sEddyProc.example | sEddyProc - Example code |
| sEddyProc.new | sEddyProc$new - Initialization of sEddyProc |
| sEstUstarThreshold | sEddyProc$sEstUstarThreshold - Estimating ustar threshold |
| sEstUstarThresholdDistribution | sEstUstarThresholdDistribution |
| sExportData | sEddyProc$sExportData - Export internal sDATA data frame |
| sExportResults | sEddyProc$sExportData - Export internal sTEMP data frame with... |
| sFillInit | sEddyProc$sFillInit - Initialize gap filling |
| sFillLUT | sEddyProc$sFillLUT - Gap filling with Look-Up Table (LUT) |
| sFillMDC | sEddyProc$sFillMDC - Gap filling with Mean Diurnal Course... |
| sGetData | sEddyProc$sGetData - Get internal sDATA data frame |
| sGLFluxPartition | sGLFluxPartition: Flux partitioning after Lasslop et al.... |
| sMDSGapFill | sEddyProc$sMDSGapFill - MDS gap filling algorithm |
| sMDSGapFillAfterUstar | sEddyProc$sMDSGapFillAfterUstar - MDS gap filling algorithm... |
| sMDSGapFillAfterUStarDistr | GapFilling for several filters of estimated friction velocity... |
| sMRFluxPartition | sEddyProc$sMRFluxPartition - Flux partitioning after... |
| sPlotDailySums | sEddyProc$sPlotDailySums - Image with daily sums of each year |
| sPlotDailySumsY | sEddyProc$sPlotDailySumsY - Plot daily sum of specified year |
| sPlotDiurnalCycle | sEddyProc$sPlotDiurnalCycle - Image with diurnal cycles of... |
| sPlotFingerprint | sEddyProc$sPlotFingerprint - Image with fingerprints of each... |
| sPlotFingerprintY | sEddyProc$sPlotFingerprintY - Plot fingerprint of specified... |
| sPlotHHFluxes | sEddyProc$sPlotHHFluxes - Image with half-hourly fluxes for... |
| sPlotHHFluxesY | sEddyProc$sPlotHHFluxesY - Plot half-hourly fluxes of... |
| sPlotNEEVersusUStarForSeason | sEddyProc$sPlotNEEVersusUStarForSeason - Image with NEE... |
| sPrintFrames | sEddyProc$sPrintFrames - Print internal sDATA and sTEMP data... |
| sRegrE0fromShortTerm | sEddyProc$sRegrE0fromShortTerm - Estimation of the... |
| sRegrRref | sEddyProc$sRegrRref - Estimation of the time series of... |
| sSetLocationInfo | sSetLocationInfo |
| usControlUstarEst | usControlUstarEst |
| usControlUstarSubsetting | usControlUstarSubsetting |
| usCreateSeasonFactorMonth | usCreateSeasonFactorMonth |
| usCreateSeasonFactorMonthWithinYear | usCreateSeasonFactorMonthWithinYear |
| usCreateSeasonFactorYday | usCreateSeasonFactorYday |
| usCreateSeasonFactorYdayYear | usCreateSeasonFactorYdayYear |
| usEstUstarThreshold | usEstUstarThreshold - Estimating ustar threshold |
| usEstUstarThresholdSingleFw1Binned | usEstUstarThresholdSingleFw1Binned |
| usEstUstarThresholdSingleFw2Binned | usEstUstarThresholdSingleFw2Binned |
| usGetAnnualSeasonUStarMappingFromDistributionResult | usGetAnnualSeasonUStarMappingFromDistributionResult |
| usGetSeaonalSeasonUStarMappingFromDistributionResult | usGetSeaonalSeasonUStarMappingFromDistributionResult |
| usGetSeasonalSeasonUStarMappingFromDistributionResult | usGetSeasonalSeasonUStarMappingFromDistributionResult |
| usGetValidUstarIndices | usGetValidUstarIndices |
| usGetYearOfSeason | usGetYearOfSeason |
| whichValueGreaterEqualC | whichValueGreaterEqualC |
