Description Usage Arguments Examples
Computes MOPAC kernel matrices for the training set and saves it to file
1 2 3 4 5 6 | cmf_comp_mopac_kernels_train(
train_fname = "ligands-train.mol2", # Training set file name
mopac_res_fname = "ligands-mopac-res-train.RData", # File with MOPAC results
mopac_kernels_train_fname = "ligands-mopac-kernels-train.RData", # Computed MOPAC kernels file name
print_comp_kernels = TRUE # Verbose computation of kernels
)
|
train_fname |
"ligands-train.mol2" |
mopac_res_fname |
"ligands-mopac-res-train.RData" |
mopac_kernels_train_fname |
"ligands-mopac-kernels-train.RData" |
print_comp_kernels |
TRUE |
1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | ##---- Should be DIRECTLY executable !! ----
##-- ==> Define data, use random,
##-- or do help(data=index) for the standard data sets.
## The function is currently defined as
cmf_comp_mopac_kernels_train <- function
(
train_fname = "ligands-train.mol2", # Training set file name
mopac_res_fname = "ligands-mopac-res-train.RData", # File with MOPAC results
mopac_kernels_train_fname = "ligands-mopac-kernels-train.RData", # Computed MOPAC kernels file name
print_comp_kernels = TRUE # Verbose computation of kernels
)
{
}
|
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