modelData: An example data set
In dmt: Dependency Modeling Toolkit
Description
Usage
Format
Source
Examples
Description
Preprocessed gene expression and gene copy number levels of 51 patients in
chromosome 17 for 10 genes.
Usage
1
data(modelData)
Format
- X
Gene expression levels in matrix form. Genes are in
columns and samples in rows.
- Y
Gene copy number levels in matrix form. Genes are in
columns and samples in rows.
Source
Integrated gene copy number and expression microarray analysis
of gastric cancer highlights potential target genes. Myllykangas et
al., International Journal of Cancer, vol. 123,
no. 4, pp. 817–25, 2008.
Examples
1
2
3
4
data(modelData)
model <- fit.dependency.model(X, Y)
model
dmt documentation built on May 2, 2019, 5:49 p.m.
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Description Usage Format Source Examples
Description
Preprocessed gene expression and gene copy number levels of 51 patients in chromosome 17 for 10 genes.
Usage
1 | data(modelData)
|
Format
- X
Gene expression levels in matrix form. Genes are in columns and samples in rows.
- Y
Gene copy number levels in matrix form. Genes are in columns and samples in rows.
Source
Integrated gene copy number and expression microarray analysis of gastric cancer highlights potential target genes. Myllykangas et al., International Journal of Cancer, vol. 123, no. 4, pp. 817–25, 2008.
Examples
1 2 3 4 | data(modelData)
model <- fit.dependency.model(X, Y)
model
|
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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