fusedanova: Fused-ANOVA

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This package implements Fused-ANOVA, a penalized method to solve the one-way ANOVA problem by collapsing the coefficients of K conditions. It reconstructs a balanced tree structure between the condition with a homotopy algorithm in O(K log(K)).

Author
Pierre Gutierrez, Julien Chiquet, Guillem Rigaill
Date of publication
2016-04-22 13:20:48
Maintainer
Julien Chiquet <julien.chiquet@genopole.cnrs.fr>
License
GPL (>=2)
Version
0.1-0

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Man pages

aves
Birth weight of birds with two levels of phylogenetic...
cv.fa
Cross-validation function for fusedanova method.
cv.fa-class
Class "cv.fa"
dataconvert
Conversion method for a fusedanova object
fusedanova
Fit a Fused ANOVA model
fusedanova-class
Class "fusedanova"
fusedanova-package
Fused-ANOVA package: general presentation
plot.cv.fa
Plot method for cross validated error of a 'fusedanova' model
plot.fusedanova
Plot method for a fusedanova object
predict.fusedanova
Predict method for a fusedanova object

Files in this package

fusedanova/DESCRIPTION
fusedanova/NAMESPACE
fusedanova/NEWS
fusedanova/R
fusedanova/R/aves.R
fusedanova/R/crossval.R
fusedanova/R/crossval_class.R
fusedanova/R/fusedanova-class.R
fusedanova/R/fusedanova-package.R
fusedanova/R/fusedanova.R
fusedanova/R/init.R
fusedanova/data
fusedanova/data/aves.RData
fusedanova/inst
fusedanova/inst/tests
fusedanova/inst/tests/run-all.R
fusedanova/inst/tests/test_cluster.R
fusedanova/inst/tests/test_cv.R
fusedanova/inst/tests/test_flsa.R
fusedanova/inst/tests/test_pred.R
fusedanova/inst/tests/test_withsplit.R
fusedanova/man
fusedanova/man/aves.Rd
fusedanova/man/cv.fa-class.Rd
fusedanova/man/cv.fa.Rd
fusedanova/man/dataconvert.Rd
fusedanova/man/fusedanova-class.Rd
fusedanova/man/fusedanova-package.Rd
fusedanova/man/fusedanova.Rd
fusedanova/man/plot.cv.fa.Rd
fusedanova/man/plot.fusedanova.Rd
fusedanova/man/predict.fusedanova.Rd
fusedanova/src
fusedanova/src/Groups.h
fusedanova/src/MainGraph.h
fusedanova/src/Maingraph.cc
fusedanova/src/Makevars
fusedanova/src/Makevars.win
fusedanova/src/MxFlowGraph.cc
fusedanova/src/MxFlowGraph.h
fusedanova/src/interfaceNS.cpp
fusedanova/src/interfaceWS.cpp
fusedanova/src/nosplit.cpp
fusedanova/src/nosplit.h
fusedanova/src/withsplit.cpp
fusedanova/src/withsplit.h