fusedanova: Fused-ANOVA
Version 0.1-0

This package implements Fused-ANOVA, a penalized method to solve the one-way ANOVA problem by collapsing the coefficients of K conditions. It reconstructs a balanced tree structure between the condition with a homotopy algorithm in O(K log(K)).

AuthorPierre Gutierrez, Julien Chiquet, Guillem Rigaill
Date of publication2016-04-22 13:20:48
MaintainerJulien Chiquet <julien.chiquet@genopole.cnrs.fr>
LicenseGPL (>=2)
Version0.1-0
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("fusedanova", repos="http://R-Forge.R-project.org")

Getting started

Package overview

Popular man pages

aves: Birth weight of birds with two levels of phylogenetic...
fusedanova: Fit a Fused ANOVA model
fusedanova-class: Class "fusedanova"
fusedanova-package: Fused-ANOVA package: general presentation
plot.cv.fa: Plot method for cross validated error of a 'fusedanova' model
plot.fusedanova: Plot method for a fusedanova object
predict.fusedanova: Predict method for a fusedanova object
See all...

All man pages Function index File listing

Man pages

aves: Birth weight of birds with two levels of phylogenetic...
cv.fa: Cross-validation function for fusedanova method.
cv.fa-class: Class "cv.fa"
dataconvert: Conversion method for a fusedanova object
fusedanova: Fit a Fused ANOVA model
fusedanova-class: Class "fusedanova"
fusedanova-package: Fused-ANOVA package: general presentation
plot.cv.fa: Plot method for cross validated error of a 'fusedanova' model
plot.fusedanova: Plot method for a fusedanova object
predict.fusedanova: Predict method for a fusedanova object

Functions

aves Man page
calculatepath Source code
cv.fa Man page Source code
cv.fa-class Man page
dataconvert Man page
dataconvert,fusedanova-method Man page
default.args.cv Source code
default.args.fa Source code
fillin Source code
fusedanova Man page Source code
fusedanova-class Man page
fusedanova-package Man page
multiplot Source code
normalize Source code
normalize.cv Source code
onAttach Source code
plot,cv.fa-method Man page
plot,fusedanova-method Man page
predict,fusedanova-method Man page
print,fusedanova-method Man page
show,fusedanova-method Man page
simplecv Source code

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/aves.R
R/crossval.R
R/crossval_class.R
R/fusedanova-class.R
R/fusedanova-package.R
R/fusedanova.R
R/init.R
data
data/aves.RData
inst
inst/tests
inst/tests/run-all.R
inst/tests/test_cluster.R
inst/tests/test_cv.R
inst/tests/test_flsa.R
inst/tests/test_pred.R
inst/tests/test_withsplit.R
man
man/aves.Rd
man/cv.fa-class.Rd
man/cv.fa.Rd
man/dataconvert.Rd
man/fusedanova-class.Rd
man/fusedanova-package.Rd
man/fusedanova.Rd
man/plot.cv.fa.Rd
man/plot.fusedanova.Rd
man/predict.fusedanova.Rd
src
src/Groups.h
src/MainGraph.h
src/Maingraph.cc
src/Makevars
src/Makevars.win
src/MxFlowGraph.cc
src/MxFlowGraph.h
src/interfaceNS.cpp
src/interfaceWS.cpp
src/nosplit.cpp
src/nosplit.h
src/withsplit.cpp
src/withsplit.h
fusedanova documentation built on May 21, 2017, 12:18 a.m.

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs in the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.