Qassignate: Qassignate

In gammadnamix: Package for intepretation of quantitative DNA mixtures

Description

Q-assignation. It also takes care of include new alleles into popFreq by assigning it lowest observed frequnce.

Usage

Qassignate(samples, popFreq, refData = NULL, doQ = TRUE)

Arguments

samples	A List with samples which for each samples has locus-list elements with list elements adata and hdata. 'adata' is a qualitative (allele) data vector and 'hdata' is a quantitative (peak heights) data vector.
popFreq	A list of allele frequencies for a given population.
refData	Reference objects with list element [[s]]$adata[[i]]. The list element has reference-list with list-element 's' having a loci-list adata with list-element 'i storing qualitative data.

Details

Assignes non-shown alleles as one single allele.

Value

ret A list(popFreq,refData) with Q-assignated alleles.

Author(s)

Oyvind Bleka <Oyvind.Bleka.at.fhi.no>

gammadnamix documentation built on May 2, 2019, 4:59 p.m.