gplots: Various R Programming Tools for Plotting Data

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Various R programming tools for plotting data, including: - calculating and plotting locally smoothed summary function as ('bandplot', 'wapply'), - enhanced versions of standard plots ('barplot2', 'boxplot2', 'heatmap.2', 'smartlegend'), - manipulating colors ('col2hex', 'colorpanel', 'redgreen', 'greenred', 'bluered', 'redblue', 'rich.colors'), - calculating and plotting two-dimensional data summaries ('ci2d', 'hist2d'), - enhanced regression diagnostic plots ('lmplot2', 'residplot'), - formula-enabled interface to 'stats::lowess' function ('lowess'), - displaying textual data in plots ('textplot', 'sinkplot'), - plotting a matrix where each cell contains a dot whose size reflects the relative magnitude of the elements ('balloonplot'), - plotting "Venn" diagrams ('venn'), - displaying Open-Office style plots ('ooplot'), - plotting multiple data on same region, with separate axes ('overplot'), - plotting means and confidence intervals ('plotCI', 'plotmeans'), - spacing points in an x-y plot so they don't overlap ('space').

Author
Gregory R. Warnes, Ben Bolker, Lodewijk Bonebakker, Robert Gentleman, Wolfgang Huber Andy Liaw, Thomas Lumley, Martin Maechler, Arni Magnusson, Steffen Moeller, Marc Schwartz, Bill Venables
Date of publication
2016-08-12 17:18:32
Maintainer
Gregory R. Warnes <greg@warnes.net>
License
GPL-2
Version
3.0.3

View on R-Forge

Man pages

angleAxis
Add a Axis to a Plot with Rotated Labels
balloonplot
Plot a graphical matrix where each cell contains a dot whose...
bandplot
Plot x-y Points with Locally Smoothed Mean and Standard...
barplot2
Enhanced Bar Plots
boxplot2
Produce a Boxplot Annotated with the Number of Observations
ci2d
Create 2-dimensional empirical confidence regions
col2hex
Convert color names to hex RGB strings
colorpanel
Generate a smoothly varying set of colors
gplots-defunct
Defunct functions
gplots-deprecated
Deprecated functions
heatmap.2
Enhanced Heat Map
hist2d
Compute and Plot a 2-Dimensional Histogram
lmplot2
Plots to assess the goodness of fit for the linear model...
lowess
Scatter Plot Smoothing
ooplot
Create an OpenOffice style plot
overplot
Plot multiple variables on the same region, with appropriate...
plotCI
Plot Error Bars and Confidence Intervals
plotmeans
Plot Group Means and Confidence Intervals
qqnorm.aov
Makes a half or full normal plot for the effects from an aov...
residplot
Undocumented functions
rich.colors
Rich Color Palettes
rtPCR
Teratogenesis rtPCR data
sinkplot
Send textual R output to a graphics device
space
Space points in an x-y plot so they don't overlap.
textplot
Display text information in a graphics plot.
venn
Plot a Venn diagram
wapply
Compute the Value of a Function Over a Local Region Of An X-Y...

Files in this package

gplots/ChangeLog
gplots/DESCRIPTION
gplots/NAMESPACE
gplots/NEWS
gplots/R
gplots/R/angleAxis.R
gplots/R/balloonplot.R
gplots/R/bandplot.R
gplots/R/barplot2.R
gplots/R/baseOf.R
gplots/R/boxplot2.R
gplots/R/ci2d.R
gplots/R/col2hex.R
gplots/R/colorpanel.R
gplots/R/heatmap.2.R
gplots/R/hist2d.R
gplots/R/layout_set.R
gplots/R/lmplot2.R
gplots/R/lowess.R
gplots/R/ooplot.R
gplots/R/overplot.R
gplots/R/plot.lowess.R
gplots/R/plot.venn.R
gplots/R/plotCI.R
gplots/R/plotNode.R
gplots/R/plotmeans.R
gplots/R/print.ci2d.R
gplots/R/print.hist2d.R
gplots/R/qqnorm.aov.R
gplots/R/replaceTabs.R
gplots/R/residplot.R
gplots/R/rich.colors.R
gplots/R/sinkplot.R
gplots/R/smartlegend.R
gplots/R/space.R
gplots/R/textplot.R
gplots/R/venn.R
gplots/R/vennMembers.R
gplots/R/wapply.R
gplots/TODO
gplots/build
gplots/build/vignette.rds
gplots/data
gplots/data/rtPCR.rda
gplots/inst
gplots/inst/ChangeLog
gplots/inst/NEWS
gplots/inst/TODO
gplots/inst/doc
gplots/inst/doc/BalloonPlot.pdf
gplots/inst/doc/venn.R
gplots/inst/doc/venn.Rnw
gplots/inst/doc/venn.pdf
gplots/man
gplots/man/angleAxis.Rd
gplots/man/balloonplot.Rd
gplots/man/bandplot.Rd
gplots/man/barplot2.Rd
gplots/man/boxplot2.Rd
gplots/man/ci2d.Rd
gplots/man/col2hex.Rd
gplots/man/colorpanel.Rd
gplots/man/gplots-defunct.Rd
gplots/man/gplots-deprecated.Rd
gplots/man/heatmap.2.Rd
gplots/man/hist2d.Rd
gplots/man/lmplot2.Rd
gplots/man/lowess.Rd
gplots/man/ooplot.Rd
gplots/man/overplot.Rd
gplots/man/plotCI.Rd
gplots/man/plotmeans.Rd
gplots/man/qqnorm.aov.Rd
gplots/man/residplot.Rd
gplots/man/rich.colors.Rd
gplots/man/rtPCR.Rd
gplots/man/sinkplot.Rd
gplots/man/space.Rd
gplots/man/textplot.Rd
gplots/man/venn.Rd
gplots/man/wapply.Rd
gplots/tests
gplots/tests/dat.csv
gplots/tests/heatmap2Test.R
gplots/tests/heatmap2Test.Rout.save
gplots/tests/heatmap_to_heatmap.2_test.R
gplots/tests/plotmeans_nobars.R
gplots/tests/test_plottingDeepDendrogram.R
gplots/vignettes
gplots/vignettes/venn.Rnw