Man pages for greenbrown
Land Surface Phenology and Trend Analysis

AccuracyAssessmentAccuracy assessment from a contingency table
AllEqualCheck if all values in a vector are the same
AllTstepsConvert an irregular zoo time series to a zoo time series...
AnomaliesFiltersLagsCalculate anomalies, lags and rolling windows
brgr.colorsBrown-to-green color palette for NDVI trend maps
ColorMatrixCreate a square matrix of colors
CompareClassificationCompare two classification maps
CorrectDOYCorrect day-of-year time series
CropNACrop outer NA values from a raster
DecomposeSimple decomposition of time series
FillPermanentGapsFill permanent gaps in time series
FitDoubleLogBeckFit a double logisitic function to a vector according to Beck...
FitDoubleLogElmoreFit a double logisitic function to a vector according to...
GetInfoVI3gGet meta-information from GIMMS VI3g binary file names
GetTsStatisticsRasterEstimate statistical properties of time series in a...
greenbrown-packageLand Surface Phenology and Trend Analysis
GreenupIdentify greenup and senescence periods in time series
InterpolateMatrixInterpolate NA values in a matrix using a moving mean
IsPermanentGapIdentify if a gap in a time series occurs permanently
KappaCalculate the Kappa coefficient of two classifications
KGECompute Kling-Gupta efficiency and related metrics of two...
KGERasterCompute Kling-Gupta efficiency and related metrics of two...
KGETrendUncertaintyCompute uncertainty of Kling-Gupta efficiency based on...
LmSeasonalCycleCalculate the mean seasonal cycle of a time series based on a...
MapBreakpointsPlot map of breakpoints
MeanSeasonalCycleCalculate the mean seasonal cycle of a time series
NamesPhenologyRasterGet the layer names for a PhenologyRaster raster brick
NamesTrendRasterGet the layer names for a TrendRaster raster brick
ndviTime series of Normalized Difference Vegetation Index
ndvimapMap of Normalized Difference Vegetation Index
NoBPInitialize an empty list with breakpoints
NoTrendInitialize an empty object of class "Trend"
PhenoDerivMethod 'Deriv' to calculate phenology metrics
PhenologyCalculate phenology metrics in time series
PhenologyNCDFCalculate phenology metrics on time series in gridded...
PhenologyRasterCalculate phenology metrics on time series in gridded...
PhenopixMYMulti-year phenology analysis using phenopix
PhenoTrsMethod 'Trs' to calculate phenology metrics
plot.CompareClassificationplot a comparison of two classification rasters
PlotPhenCyclePlot a easonal cycle with phenology metrics
plot.PhenologyPlot time series of phenology metrics
plot.PhenopixMYPlot multi-year phenopix objects
plot.TrendPlot trend and breakpoint results
plot.TrendGradientPlotting function for objects of class TrendGradient
plot.TrendSamplePlot uncertainty of estimated trend dependent on start and...
PolygonNAPlot a polygon by accounting for NA values (breaks in...
print.PhenologyPrints phenology metrics
print.TrendPrints trends
ReadVI3gRead and pre-process GIMMS VI3g binary files
SeasonalityCheck a time series for seasonality
SimIAVSimulate the inter-annual variability component of a...
SimRemSimulate the short-term variability component of a surrogate...
SimSeasSimulate the seasonal component of a surrogate time series
SimTrendSimulate trend and breakpoints of a surrogate time series
SimTsSimulate surrogate time series
SplitRasterEquallySplits a raster in equal-area parts
SSASeasonalCycleCalculate a modulated seasonal cycle of a time series based...
TrendCalculate trends and trend changes in time series
TrendAATTrend estimation based on annual aggregated time series
TrendClassificationClassify a raster in greening and browning trends
TrendGradientCalculate temporal trends along a spatial gradient
TrendLongestSEGExtract slope and p-value for the longest time series segment...
TrendNCDFCalculate trends and trend statistics on time series in...
TrendPolyTrend estimation based on a 4th order polynomial
TrendRasterCalculate trends on time series in gridded (raster) data
TrendRQTrend estimation based on quantile regression
TrendRunmedTrend estimation based on a running median
TrendSampleCompute trend statistics by sampling a time series according...
TrendSeasonalAdjustedTrend estimation based on seasonal-adjusted time series
TrendSegmentsRasterIdentify for each multi-temporal raster layer the number of...
TrendSplineTrend estimation based on a smoothing splines
TrendSSATrend estimation based on SSA (singluar spectrum analysis)
TrendSTLTrend estimation based on STL (Seasonal Decomposition of Time...
TrendSTMTrend estimation based on a season-trend model
TrendUncertaintyCompute uncertainties in trend statistics according to...
TSGFdoublelogTemporal smoothing and gap filling using double logisitic...
TSGFlinearTemporal smoothing and gap filling using linear interpolation
TSGFphenopixTemporal smoothing and gap filling using phenopix
TSGFsplineTemporal smoothing and gap filling using splines
TSGFssaTemporal smoothing and gap filling using singular spectrum...
TSGFstmTemporal smoothing and gap filling based on a season-trend...
TsPPPre-processing of time series
WriteNCDFWrite raster objects to NetCDF files
WriteNCDF4Write NetCDF files
greenbrown documentation built on May 2, 2019, 5:52 p.m.