plot.sigfit: Basic display methods for objects fitted by the "sigfit"...

Description Usage Arguments Details Value Author(s) See Also Examples

View source: R/methods.sigfit.R

Description

Use these functions to print out, summarize and make plots of fitted immunoassay run objects of class sigfit.

Usage

1
2
3
4
5
6
    ## S3 method for class 'sigfit'
plot(x, table = TRUE, type = "fit", norm = "weighted", ...)
    ## S3 method for class 'sigfit'
print(x, ...)
    ## S3 method for class 'sigfit'
summary(object, ...)

Arguments

x

An object of class sigfit.

object

An object of class sigfit, for consistency with generic summary method.

table

Logical, whether to print the coefficients or not, defaults to TRUE.

type

Character. Either "fit" - to plot the fit line and the data points; or "resid" to plot the residuals. Defaults to "fit"

norm

Character. For the plot type="resid", this is the normalization type. Either "standardized" for standardized residuals, or "weighted" for weighted residuals. Defaults to "weighted".

...

Other parameters passed along to the plot() function. In print and summary methods - currently ignored.

Details

These are the most basic methods used to display sigmoidal fit objects from the sigfit function. Useful utility functions for LaTeX report templates.

Value

The functions print.sigfit and plot.sigfit are used exclusively for their side effects and do not return anything. Function summary.sigfit returns a list of the following elements:

fit

An actual summary of the nls fit.

res

A table of summary results for Standards and QCs.

stats

A table of fit statistics.

Author(s)

Michal J. Figurski, PhD mfigrs@gmail.com

See Also

sigfit and predict.sigfit.

Examples

1
2
3
4
5
6
7
8
## Not run: 
    run = read.multiplex("your-path-here")
    fit = sigfit(run)
    fit
    summary(fit)
    plot(fit)

## End(Not run)

immunoassay documentation built on May 2, 2019, 4:45 p.m.