inspectr: Storing, manipulating and analysis spectroscopy and associated data in R.
Version 0.3-15

Stores and eases the manipulation of spectra and associated data, with dedicated classes for spatial and soil-related datasets.

Browse man pages Browse package API and functions Browse package files

AuthorPierre Roudier <pierre.roudier@gmail.com>
Date of publication2014-05-12 03:15:43
MaintainerPierre Roudier <pierre.roudier@gmail.com>
LicenseGPL
Version0.3-15
URL http://inspectr.r-forge.r-project.org/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("inspectr", repos="http://R-Forge.R-project.org")

Man pages

aggregate_spectra: Aggregates spectral and data information
apply_spectra: Apply a function on the spectra of a Spectra* object
australia: Australia spectra library data set
baseline: Baseline correction using the baseline package
big.head: Return the First or Last Part of an Object
continuum_removal: Continuum removal
coordinates: Sets spatial coordinates to create 'SpatialSpectraDataFrame'...
cut: Manipulating the wavelength range of a 'Spectra' object
extract: Extracting and replacing parts of Spectra* objects
features: Retrieves or sets the data slot of a SpectraDataFrame object.
fill_spectra: Fill missing wavelengths of a Spectra* object with a given...
ids: Retrieves or sets the ids of a 'Spectra*' object.
kenstone: Kennard-Stone algorithm for optimal calibration set...
melt_spectra: melt_spectra
mutate: Mutate a Spectra* object by transforming the spectra values,...
nrow: Retrieve dimensions of Spectra* objects
plot.Spectra: Plots an object inheriting from the Spectra class
rbind: Stacking 'Spectra' objects together
separate: Separates a 'Spectra*' object into a calibration and a...
snv: Standard and Robust Normal Variate transformations
SpatialSpectraDataFrame: Constructor for the SpatialSpectraDataFrame class.
Spectra: Constructor for the Spectra class.
Spectra-classes: Spectra* classes
SpectraDataFrame: Constructor for the SpectraDataFrame class.
spectra-methods: Retrieves or sets the spectra of a 'Spectra*' objects.
splice: "Splicing" and interpolation of spectra
split: Split a Spectra* object using factors
subset: Subset SpectraDataFrame object
summary: Summary
wl-methods: Retrieves or sets the wavelengths of a 'Spectra*' object.
wl_units: Wavelengths of Spectra* objects

Functions

"Splicing" and interpolation Man page
$ Man page
$,SpectraDataFrame-method Man page
$<- Man page
$<-,Spectra-method Man page
SpatialSpectra-class Man page
SpatialSpectraDataFrame Man page
SpatialSpectraDataFrame-class Man page
Spectra Man page
Spectra-class Man page
SpectraDataFrame Man page
SpectraDataFrame-class Man page
[ Man page
[,Spectra,ANY,ANY,missing-method Man page
[,SpectraDataFrame,ANY,ANY,missing-method Man page
[<- Man page
[<-,SpectraDataFrame-method Man page
[[ Man page
[[,SpectraDataFrame,ANY,missing-method Man page
[[<- Man page
[[<-,Spectra,ANY,missing-method Man page
aggregate_spectra Man page
aggregate_spectra,Spectra-method Man page
aggregate_spectra,SpectraDataFrame-method Man page
apply_spectra Man page Source code
as.data.frame.SpatialSpectra Man page Source code
as.data.frame.Spectra Man page Source code
as.data.frame.SpectraDataFrame Man page Source code
australia Man page
base_line Man page
base_line,Spectra-method Man page
big.head Man page Man page Source code
big.tail Man page Man page Source code
continuum_removal Man page Source code
coordinates<- Man page
coordinates<-,SpectraDataFrame-method Man page
cut Man page
cut,Spectra-method Man page
dim Man page
dim.Spectra Man page Source code
distToMean Source code
distToSubset Source code
features Man page
features,SpectraDataFrame-method Man page
features-methods Man page
features<- Man page
features<-,Spectra-method Man page
features<-,SpectraDataFrame-method Man page
fill_spectra Man page Source code
findSpectraCols Source code
guessWl Source code
ids Man page
ids,Spectra-method Man page
ids<- Man page
ids<-,Spectra-method Man page
ids<-,SpectraDataFrame-method Man page
inspectr Man page
kenstone Man page
kenstone,Spectra-method Man page
kenstone.matrix Source code
length Man page
length.Spectra Man page Source code
melt_spectra Man page
melt_spectra,Spectra-method Man page
melt_spectra,SpectraDataFrame-method Man page
melt_spectra-methods Man page
mutate Man page
mutate,Spectra-method Man page
mutate.Spectra Man page
names.SpectraDataFrame Man page Source code
names<-.SpectraDataFrame Man page
ncol,Spectra-method Man page
nrow,Spectra-method Man page
onLoad Source code
parse_formula Source code
plot,Spectra,ANY-method Man page
plot.Spectra Man page Source code
plot_offset Man page
plot_offset,Spectra-method Man page
plot_stack Man page
plot_stack,Spectra-method Man page
plot_summary Man page
plot_summary,Spectra-method Man page
print,Spectra-method Man page
print.summary.Spectra Man page Source code
rbind.Spectra Man page Source code
rbind.SpectraDataFrame Man page
res Man page
res,Spectra-method Man page
res,integer-method Man page
res,numeric-method Man page
res.Spectra Man page Source code
res.integer Man page
res.numeric Man page Source code
rnv Man page Source code
separate Man page
separate,Spectra-method Man page
separate.Spectra Man page
set_spectra_by_col.data.frame Source code
set_spectra_by_row.data.frame Source code
show,Spectra-method Man page
snv Man page Source code
spectra Man page
spectra,Spectra-method Man page
spectra<- Man page
spectra<-,Spectra-method Man page
spectra<-,SpectraDataFrame-method Man page
spectra<-,data.frame-method Man page
splice,Spectra-method Man page
splice.Spectra Source code
splice.numeric Source code
split Man page
split,Spectra-method Man page
split.Spectra Man page
subset Man page
subset,SpectraDataFrame-method Man page
subset.SpectraDataFrame Man page Source code
summary.Spectra Man page Source code
try_require Source code
wl Man page
wl,Spectra-method Man page
wl<- Man page
wl<-,Spectra-method Man page
wl<-,data.frame-method Man page
wl_units Man page
wl_units,Spectra-method Man page
wl_units<- Man page
wl_units<-,Spectra-method Man page

Files

DESCRIPTION
NAMESPACE
NEWS
R
R/AAA-Classes.R
R/SpatialSpectraDataFrame-methods.R
R/Spectra-methods.R
R/SpectraDataFrame-methods.R
R/ZZZ.R
R/aggregate_spectra.R
R/big_head.R
R/helpers.R
R/kenstone.R
R/performance.R
R/plot-methods.R
R/preprocessing.R
R/setters.R
R/splice.R
README.md
TODO
data
data/australia.rda
data/datalist
inst
inst/CITATION
inst/doc
inst/doc/inspectr-intro.Rnw
man
man/SpatialSpectraDataFrame.Rd
man/Spectra-classes.Rd
man/Spectra.Rd
man/SpectraDataFrame.Rd
man/aggregate_spectra.Rd
man/apply_spectra.Rd
man/australia.Rd
man/baseline.Rd
man/big.head.Rd
man/continuum_removal.Rd
man/coordinates.Rd
man/cut.Rd
man/extract.Rd
man/features.Rd
man/fill_spectra.Rd
man/ids.Rd
man/kenstone.Rd
man/melt_spectra.Rd
man/mutate.Rd
man/nrow.Rd
man/plot.Spectra.Rd
man/rbind.Rd
man/separate.Rd
man/snv.Rd
man/spectra-methods.Rd
man/splice.Rd
man/split.Rd
man/subset.Rd
man/summary.Rd
man/wl-methods.Rd
man/wl_units.Rd
inspectr documentation built on May 21, 2017, 1:35 a.m.