create_model: A mechanism for creating a stochastic kinetic model (skm)

In issb: R code associated with the book chapter "Simulation of stochastic kinetic models"

Description

A mechanism for creating a stochastic kinetic model (skm)

Usage

  create_model(stoic, hazards, initial, pars,
    jacobian = NULL)

Arguments

stoic	the stoichiometric of the skm model. The number of rows should equal the number of species and the number of columns should equal the number of reactions.
hazards	a function for calculating the reaction hazards.
initial	a vector containing the initial conditions of the model.
pars	a vector containing the parameter values.
jacobian	only needed when simulating from the linear noise approximation.

Value

A list with class skm

Author(s)

Colin Gillespie

Examples

demo(lv)

issb documentation built on May 2, 2019, 4:43 p.m.