mastermix: Procedure for deconvolving, weight-evidence and database search using STR DNA mixtures

mastermix includes procedure for optimizing linear gaussian deconvolution model handling STR DNA mixtures. It also contain quick weight-of-evidence and database searching. Other procedures as estimation of allele drop-out probability is also included.

AuthorOyvind Bleka <Oyvind.bleka@fhi.no>
Date of publication2014-10-06 11:23:08
MaintainerOyvind Bleka <Oyvind.bleka@fhi.no>
LicenseGPL(>=2)
Version1.6.0

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Files

DESCRIPTION
NAMESPACE
R
R/calcDOdistr.R R/deconvolve.R R/genDataset.R R/getContrCombs.R R/mastermixTK.R R/plotEPG.R R/pvalueC.R
inst
inst/FreqDatabases
inst/FreqDatabases/ESX17_Norway.csv
inst/FreqDatabases/Identifiler_Caucasian.csv
inst/FreqDatabases/SGMPlus_Norway.csv
inst/FreqDatabases/SGM_German.csv
inst/case1
inst/case1/FreqDatabases
inst/case1/FreqDatabases/ESX17_Norway.csv
inst/case1/dbESX17.txt
inst/case1/mix1.csv
inst/case1/ref1.csv
inst/case1/ref2.csv
inst/case2
inst/case2/FreqDatabases
inst/case2/FreqDatabases/ESX17_Norway.csv
inst/case2/FreqDatabases/Identifiler_Caucasian.csv
inst/case2/FreqDatabases/SGMPlus_Norway.csv
inst/case2/FreqDatabases/SGMPlus_UK.csv
inst/case2/FreqDatabases/SGM_German.csv
inst/case2/RA-Identifiler02.txt
inst/case2/dbESX17.txt
inst/case2/mix1.csv
inst/case2/mix2.csv
inst/case2/ref1.csv
inst/case2/ref2.csv
man
man/calcDOdistr.Rd man/deconvolve.Rd man/genDataset.Rd man/getContrCombs.Rd man/mastermix-package.Rd man/mastermixTK.Rd man/plotEPG.Rd man/pvalueC.Rd
src
src/recFunCv2.c
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