start.qc: Quality analysis of evidence.txt
In mqqc: Quality control of LCMS derived proteomic data

Description Usage Arguments Author(s) See Also Examples

View source: R/start.qc.R

Function for quality control of evidence.txt data from MaxQuant analysis.

1 2	start.qc(DataEvidence = NULL, RawBased = T, n = NA, show.path = F, open.doc = F)

`DataEvidence`
`RawBased`	TRUE - all entries in evidence.txt are analyzed as one file. False - raw file based analysis, based on rawFile column in evidence table.
`n`	Number of raw files to be analyzed. If n = NA all raw files in evidence.txt will be analyzed.
`show.path`	Logical, returns path in tk window.
`open.doc`	Tries to open created pdf.

Henrik Zauber

folder.observe

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  # before run, resize Output window or set pdfOut to T (will create a folder and a pdf in your working directory)
	#data(DataEvidence)
	#start.qc(DataEvidence,pdfOut = F)

mqqc documentation built on July 30, 2020, 3 p.m.