nclbayes: Functions, Demos and Examples of Bayesian Analysis and Basic MCMC

An R package containing functions, data and examples of Bayesian analysis for use with NCL Bayes Courses.

Author
R. J. Boys [aut, cre], G. W. Stagg [ctb]
Date of publication
2016-11-30 18:08:39
Maintainer
R. J. Boys <richard.boys@ncl.ac.uk>
License
GPL-2 | GPL-3
Version
0.3.3

View on R-Forge

Man pages

abrasion
Data from an experiment to investigate how weight loss due to...
aircraft
Data on the number of 'multi-fatality crashes' in the week...
babies
Data showing the outcomes from a set of babies, categorised...
births
A dataset containing the time of birth (hh:mm), sex, and...
cavendish
Data collected by the 18th century physicist Henry Cavendish,...
coagulation
Data on the effect of three new diets on the blood...
contamination
Data on the aerobic colony counts (acc, measured in colony...
crickets
Data on the frequency of chirps made by a striped ground...
dbvnorm
The Bivariate Normal distribution
dbvt
The Bivariate t distribution
demoCommands
Launches an editor containing the commands in a demo
dgt
The Generalised t distribution
dinvchi
The Inverse Chi distribution
dnormgamma
The Normal-Gamma distribution
dnorminvchi
The Normal-InvChi distribution
elicitgzerofn
Function used in the elicitation of normal-gamma prior...
elicitNGa
Elicitation of normal-gamma prior distribution by using...
gibbsNormal
Gibbs sampler for a normal random sample with a...
gibbsNormal2
Gibbs sampler for a normal random sample with a conjugate...
gibbsReffects
Gibbs sampler for a one-way normal random effects model with...
granite
A random sample of granite gravestones was taken from a...
hdiBeta
The highest density interval (HDI) for a Beta(a,b)...
hdiGamma
The highest density interval (HDI) for a Gamma(a,b)...
hdiInvchi
The highest density interval (HDI) for a Inv-Chi(a,b)...
hepatitis
Data on the logarithm of ornithine carbonyltransferase (a...
IBMprices
Data consisting of 160 consecutive daily IBM common stock...
insulation
Data on weekly gas consumption (in thousands of cubic feet)...
leukaemia
Data on 33 leukaemia patients, classified by AG Group (1: AG...
lungs
Data on 50 patients suffering from a chronic lung disease....
malcolm
Data collected by Malcolm on the height and shoe size of a...
mcmcAnalysis
Summarise and plot tabular MCMC output
mcmcBoxplot
Box plots from MCMC output
mcmcCi
Equi-tailed confidence intervals from MCMC output
mcmcProcess
Function to remove burn-in and thin MCMC output
metropolis
Metropolis algorithm to simulate realisations from a standard...
mhReffects
Metropolis-Hastings algorithm for a one-way normal random...
mwgGamma
Metropolis within Gibbs algorithm for a gamma random sample
NGaposterior
Parameters of the NGa posterior distribution when sampling...
oldfaithful
Data on successive waiting times (in minutes) between...
protein
Data from an experiment to calibrate a near infrared...
quadform2d
Calculates a quadratic form for 2-d vectors
rats
Data on the weights of a set of thirty young rats, measured...
sales
Data on the number of orders received by a small company for...
sideeffects
Data showing the number of patients who were given different...
surgery
Data on the number of patients undergoing surgery and the...
tonsils
A dataset containing the results of a study of the tonsil...

Files in this package

nclbayes/DESCRIPTION
nclbayes/NAMESPACE
nclbayes/R
nclbayes/R/data_files.R
nclbayes/R/democommands.R
nclbayes/R/distns.R
nclbayes/R/elicitation.R
nclbayes/R/fns.R
nclbayes/R/gibbs.R
nclbayes/R/hdi.R
nclbayes/R/mcmc.R
nclbayes/R/mh.R
nclbayes/data
nclbayes/data/IBMprices.RData
nclbayes/data/abrasion.RData
nclbayes/data/aircraft.RData
nclbayes/data/babies.RData
nclbayes/data/births.RData
nclbayes/data/cavendish.txt.gz
nclbayes/data/coagulation.txt.gz
nclbayes/data/contamination.txt.gz
nclbayes/data/crickets.txt.gz
nclbayes/data/granite.RData
nclbayes/data/hepatitis.txt.gz
nclbayes/data/insulation.RData
nclbayes/data/leukaemia.RData
nclbayes/data/lungs.RData
nclbayes/data/malcolm.txt.gz
nclbayes/data/oldfaithful.RData
nclbayes/data/protein.RData
nclbayes/data/rats.RData
nclbayes/data/sales.RData
nclbayes/data/sideeffects.RData
nclbayes/data/surgery.RData
nclbayes/data/tonsils.RData
nclbayes/demo
nclbayes/demo/00Index
nclbayes/demo/cavendish.R
nclbayes/demo/coagulation.R
nclbayes/demo/complex.R
nclbayes/demo/gibbs.R
nclbayes/demo/malcolm.R
nclbayes/demo/mh.R
nclbayes/demo/review.R
nclbayes/demo/sundries.R
nclbayes/man
nclbayes/man/IBMprices.Rd
nclbayes/man/NGaposterior.Rd
nclbayes/man/abrasion.Rd
nclbayes/man/aircraft.Rd
nclbayes/man/babies.Rd
nclbayes/man/births.Rd
nclbayes/man/cavendish.Rd
nclbayes/man/coagulation.Rd
nclbayes/man/contamination.Rd
nclbayes/man/crickets.Rd
nclbayes/man/dbvnorm.Rd
nclbayes/man/dbvt.Rd
nclbayes/man/demoCommands.Rd
nclbayes/man/dgt.Rd
nclbayes/man/dinvchi.Rd
nclbayes/man/dnormgamma.Rd
nclbayes/man/dnorminvchi.Rd
nclbayes/man/elicitNGa.Rd
nclbayes/man/elicitgzerofn.Rd
nclbayes/man/gibbsNormal.Rd
nclbayes/man/gibbsNormal2.Rd
nclbayes/man/gibbsReffects.Rd
nclbayes/man/granite.Rd
nclbayes/man/hdiBeta.Rd
nclbayes/man/hdiGamma.Rd
nclbayes/man/hdiInvchi.Rd
nclbayes/man/hepatitis.Rd
nclbayes/man/insulation.Rd
nclbayes/man/leukaemia.Rd
nclbayes/man/lungs.Rd
nclbayes/man/malcolm.Rd
nclbayes/man/mcmcAnalysis.Rd
nclbayes/man/mcmcBoxplot.Rd
nclbayes/man/mcmcCi.Rd
nclbayes/man/mcmcProcess.Rd
nclbayes/man/metropolis.Rd
nclbayes/man/mhReffects.Rd
nclbayes/man/mwgGamma.Rd
nclbayes/man/oldfaithful.Rd
nclbayes/man/protein.Rd
nclbayes/man/quadform2d.Rd
nclbayes/man/rats.Rd
nclbayes/man/sales.Rd
nclbayes/man/sideeffects.Rd
nclbayes/man/surgery.Rd
nclbayes/man/tonsils.Rd