nclbayes: Functions, Demos and Examples of Bayesian Analysis and Basic MCMC

An R package containing functions, data and examples of Bayesian analysis for use with NCL Bayes Courses.

AuthorR. J. Boys [aut, cre], G. W. Stagg [ctb]
Date of publication2017-02-16 14:02:39
MaintainerR. J. Boys <richard.boys@ncl.ac.uk>
LicenseGPL-2 | GPL-3
Version0.3.7

View on R-Forge

Man pages

abrasion: Data from an experiment to investigate how weight loss due to...

aircraft: Data on the number of 'multi-fatality crashes' in the week...

babies: Data showing the outcomes from a set of babies, categorised...

births: A dataset containing the time of birth (hh:mm), sex, and...

cavendish: Data collected by the 18th century physicist Henry Cavendish,...

coagulation: Data on the effect of three new diets on the blood...

contamination: Data on the aerobic colony counts (acc, measured in colony...

crickets: Data on the frequency of chirps made by a striped ground...

dbvnorm: The Bivariate Normal distribution

dbvt: The Bivariate t distribution

demoCommands: Launches an editor containing the commands in a demo

dgt: The Generalised t distribution

dinvchi: The Inverse Chi distribution

dnormgamma: The Normal-Gamma distribution

dnorminvchi: The Normal-InvChi distribution

elicitgzerofn: Function used in the elicitation of normal-gamma prior...

elicitNGa: Elicitation of normal-gamma prior distribution by using...

gibbsNormal: Gibbs sampler for a normal random sample with a...

gibbsNormal2: Gibbs sampler for a normal random sample with a conjugate...

gibbsReffects: Gibbs sampler for a one-way normal random effects model with...

granite: A random sample of granite gravestones was taken from a...

hdiBeta: The highest density interval (HDI) for a Beta(a,b)...

hdiGamma: The highest density interval (HDI) for a Gamma(a,b)...

hdiInvchi: The highest density interval (HDI) for a Inv-Chi(a,b)...

hepatitis: Data on the logarithm of ornithine carbonyltransferase (a...

IBMprices: Data consisting of 160 consecutive daily IBM common stock...

insulation: Data on weekly gas consumption (in thousands of cubic feet)...

leukaemia: Data on 33 leukaemia patients, classified by AG Group (1: AG...

lungs: Data on 50 patients suffering from a chronic lung disease....

malcolm: Data collected by Malcolm on the height and shoe size of a...

mcmcAnalysis: Summarise and plot tabular MCMC output

mcmcBoxplot: Box plots from MCMC output

mcmcCi: Equi-tailed confidence intervals from MCMC output

mcmcProcess: Function to remove burn-in and thin MCMC output

metropolis: Metropolis algorithm to simulate realisations from a standard...

mhReffects: Metropolis-Hastings algorithm for a one-way normal random...

mwgGamma: Metropolis within Gibbs algorithm for a gamma random sample

NGaposterior: Parameters of the NGa posterior distribution when sampling...

oldfaithful: Data on successive waiting times (in minutes) between...

protein: Data from an experiment to calibrate a near infrared...

quadform2d: Calculates a quadratic form for 2-d vectors

rats: Data on the weights of a set of thirty young rats, measured...

sales: Data on the number of orders received by a small company for...

sideeffects: Data showing the number of patients who were given different...

surgery: Data on the number of patients undergoing surgery and the...

tonsils: A dataset containing the results of a study of the tonsil...

Functions

abrasion Man page
aircraft Man page
babies Man page
births Man page
cavendish Man page
coagulation Man page
contamination Man page
crickets Man page
dbvnorm Man page
dbvt Man page
demoCommands Man page
dgt Man page
dinvchi Man page
dnormgamma Man page
dnorminvchi Man page
elicitgzerofn Man page
elicitNGa Man page
gibbsNormal Man page
gibbsNormal2 Man page
gibbsReffects Man page
granite Man page
hdiBeta Man page
hdiGamma Man page
hdiInvchi Man page
hepatitis Man page
IBMprices Man page
insulation Man page
leukaemia Man page
lungs Man page
malcolm Man page
mcmcAnalysis Man page
mcmcBoxplot Man page
mcmcCi Man page
mcmcProcess Man page
metropolis Man page
mhReffects Man page
mwgGamma Man page
NGacontour Man page
NGaposterior Man page
oldfaithful Man page
pgt Man page
pinvchi Man page
protein Man page
qgt Man page
qinvchi Man page
quadform2d Man page
rats Man page
rgt Man page
rinvchi Man page
rnormgamma Man page
rnorminvchi Man page
sales Man page
sideeffects Man page
surgery Man page
tcontour Man page
tonsils Man page

Files

nclbayes/DESCRIPTION
nclbayes/NAMESPACE
nclbayes/R
nclbayes/R/data_files.R nclbayes/R/democommands.R nclbayes/R/distns.R nclbayes/R/elicitation.R nclbayes/R/fns.R nclbayes/R/gibbs.R nclbayes/R/hdi.R nclbayes/R/mcmc.R nclbayes/R/mh.R
nclbayes/data
nclbayes/data/IBMprices.RData
nclbayes/data/abrasion.RData
nclbayes/data/aircraft.RData
nclbayes/data/babies.RData
nclbayes/data/births.RData
nclbayes/data/cavendish.txt.gz
nclbayes/data/coagulation.txt.gz
nclbayes/data/contamination.txt.gz
nclbayes/data/crickets.txt.gz
nclbayes/data/granite.RData
nclbayes/data/hepatitis.RData
nclbayes/data/insulation.RData
nclbayes/data/leukaemia.RData
nclbayes/data/lungs.RData
nclbayes/data/malcolm.txt.gz
nclbayes/data/oldfaithful.RData
nclbayes/data/protein.RData
nclbayes/data/rats.RData
nclbayes/data/sales.RData
nclbayes/data/sideeffects.RData
nclbayes/data/surgery.RData
nclbayes/data/tonsils.RData
nclbayes/demo
nclbayes/demo/00Index
nclbayes/demo/cavendish.R
nclbayes/demo/coagulation.R
nclbayes/demo/complex.R
nclbayes/demo/gibbs.R
nclbayes/demo/malcolm.R
nclbayes/demo/mh.R
nclbayes/demo/review.R
nclbayes/demo/sundries.R
nclbayes/man
nclbayes/man/IBMprices.Rd nclbayes/man/NGaposterior.Rd nclbayes/man/abrasion.Rd nclbayes/man/aircraft.Rd nclbayes/man/babies.Rd nclbayes/man/births.Rd nclbayes/man/cavendish.Rd nclbayes/man/coagulation.Rd nclbayes/man/contamination.Rd nclbayes/man/crickets.Rd nclbayes/man/dbvnorm.Rd nclbayes/man/dbvt.Rd nclbayes/man/demoCommands.Rd nclbayes/man/dgt.Rd nclbayes/man/dinvchi.Rd nclbayes/man/dnormgamma.Rd nclbayes/man/dnorminvchi.Rd nclbayes/man/elicitNGa.Rd nclbayes/man/elicitgzerofn.Rd nclbayes/man/gibbsNormal.Rd nclbayes/man/gibbsNormal2.Rd nclbayes/man/gibbsReffects.Rd nclbayes/man/granite.Rd nclbayes/man/hdiBeta.Rd nclbayes/man/hdiGamma.Rd nclbayes/man/hdiInvchi.Rd nclbayes/man/hepatitis.Rd nclbayes/man/insulation.Rd nclbayes/man/leukaemia.Rd nclbayes/man/lungs.Rd nclbayes/man/malcolm.Rd nclbayes/man/mcmcAnalysis.Rd nclbayes/man/mcmcBoxplot.Rd nclbayes/man/mcmcCi.Rd nclbayes/man/mcmcProcess.Rd nclbayes/man/metropolis.Rd nclbayes/man/mhReffects.Rd nclbayes/man/mwgGamma.Rd nclbayes/man/oldfaithful.Rd nclbayes/man/protein.Rd nclbayes/man/quadform2d.Rd nclbayes/man/rats.Rd nclbayes/man/sales.Rd nclbayes/man/sideeffects.Rd nclbayes/man/surgery.Rd nclbayes/man/tonsils.Rd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.