Files in netmes
Exploratory Analysis of Gene Networks with Netmes, An R package for network-based measures
EXAMPLES.txt
DESCRIPTION
NAMESPACE
inst/CITATION
inst/doc/netmes-manual.pdf
inst/extdata/networkEcoli.sif
inst/extdata/networkDAG.sif
inst/extdata/syn/2/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/syn/2/mim.exp
inst/extdata/syn/3/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/syn/3/mim.exp
inst/extdata/syn/4/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/syn/4/mim.exp
inst/extdata/syn/1/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/syn/1/mim.exp
inst/extdata/syn/5/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/syn/5/mim.exp
inst/extdata/bio/2/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/bio/2/mim.exp
inst/extdata/bio/3/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/bio/3/mim.exp
inst/extdata/bio/4/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/bio/4/mim.exp
inst/extdata/bio/1/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/bio/1/mim.exp
inst/extdata/bio/5/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
inst/extdata/bio/5/mim.exp
R/visnet.R
R/motifcount3.R
R/readMI.R
R/plotDs.R
R/readNet.R
R/plotMotifs.R
R/motifMI.R
R/readSifNet.R
R/TPRall.R
R/evalnetworks.R
R/evalnetworksNames.R
R/motifrate.R
R/readNamesMI.R
R/sumdeg.R
man/evalnetworksNames.Rd
man/visnet.Rd
man/readSifNet.Rd
man/sumdeg.Rd
man/TPRall.Rd
man/readNet.Rd
man/motifcount3.Rd
man/evalnetworks.Rd
man/plotDs.Rd
man/plotMotifs.Rd
data/networkEcoli.sif
data/networkDAG.sif
data/syn/2/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/syn/2/mim.exp
data/syn/3/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/syn/3/mim.exp
data/syn/4/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/syn/4/mim.exp
data/syn/1/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/syn/1/mim.exp
data/syn/5/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/syn/5/mim.exp
data/bio/2/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/bio/2/mim.exp
data/bio/3/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/bio/3/mim.exp
data/bio/4/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/bio/4/mim.exp
data/bio/1/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/bio/1/mim.exp
data/bio/5/nn100_nbgr0_hop0.3_bionoise0.05_expnoise0.0_corrnoise0.0_neighAdd_maxExpr1_dataset.txt
data/bio/5/mim.exp
