These functions create functions to evaluate residuals or sums of squares at particular parameter locations.

1 2 3 4 |

`modelformula` |
A formula describing a nonlinear regression model. |

`pvec` |
A vector of parameters. |

`data` |
A dataframe, list or environment holding data used in the calculation. |

`jacobian` |
Whether to compute the Jacobian matrix. |

`gradient` |
Whether to compute the gradient vector. |

`testresult` |
Whether to test the function by evaluating it at |

`fun` |
A function produced by one of |

`...` |
Dot arguments, that is, arguments that may be supplied by |

If `pvec`

does not have names, the parameters will have names
generated in the form p_<n>, e.g. `p_1, p_2`

. Names that appear in
`pvec`

will be taken to be parameters of the model.

The `data`

argument may be a dataframe, list or environment, or `NULL`

.
If it is not an environment, one will be constructed using the components
of `data`

with parent environment set to be
the environment of `modelformula`

.

`model2rjfun`

returns a function with header `function(prm)`

, which
evaluates the residuals (and if `jacobian`

is `TRUE`

the
Jacobian matrix) of the model at `prm`

. The residuals are defined to be
the right hand side of `modelformula`

minus the left hand side.

`model2ssgrfun`

returns a function with header `function(prm)`

, which
evaluates the sum of squared residuals (and if `gradient`

is `TRUE`

the
gradient vector) of the model at `prm`

.

`modelexpr`

returns the expression used to calculate the vector of
residuals (and possibly the Jacobian) used in the previous functions.

John Nash and Duncan Murdoch

1 2 3 4 5 6 7 8 9 10 11 12 13 14 15 16 | ```
y <- c(5.308, 7.24, 9.638, 12.866, 17.069, 23.192, 31.443, 38.558,
50.156, 62.948, 75.995, 91.972)
tt <- seq_along(y) # for testing
mydata <- data.frame(y = y, tt = tt)
f <- y ~ b1/(1 + b2 * exp(-1 * b3 * tt))
p <- c(b1 = 1, b2 = 1, b3 = 1)
rjfn <- model2rjfun(f, p, data = mydata)
rjfn(p)
myexp <- modelexpr(rjfn)
cat("myexp:")
print(myexp)
ssgrfn <- model2ssgrfun(f, p, data = mydata)
ssgrfn(p)
``` |

Questions? Problems? Suggestions? Tweet to @rdrrHQ or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.