doMCMCDiags: doMCMCDiags is the master diagnostic function

In nwfscDeltaGLM: Bayesian delta-GLM package for constructing indices of CPUE data

Description

This function is a high level function to be called by the user, and implements all of the plotting, diagnostic, and output summaries available. It is applicable to one or more fitted model objects, stored in a list object.

Usage

doMCMCDiags(directory, mods, McmcDiagnostics=FALSE,...)

Arguments

directory	The directory to save output in
mods	A list of one or more fitted delta-GLMM model objects
McmcDiagnostics	Boolean indicating whether or not to make the MCMCdiagnostics plots, defaults to FALSE.
...	Other arguments can be passed.

See Also

MapData, ConvergencePlot, McmcDiagnosticsPlot, PlotOffset, PosteriorPredictive, ComputeIndices, ComputeMleIndices

nwfscDeltaGLM documentation built on May 2, 2019, 6:30 p.m.