oompaBase: Class Unions, Matrix Operations, and Color Schemes for OOMPA

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The oompaBase package defines the class unions that must be preloaded in order for the basic tools in the OOMPA (object-oriented microarray and proteomics analysis) project to be defined and loaded. It also includes vectorized operations for row-by-row means, variances, and t-tests. Finally, it provides new color schemes.

Author
Kevin R. Coombes
Date of publication
2016-05-09 20:43:21
Maintainer
Kevin R. Coombes <krc@silicovore.com>
License
Apache License (== 2.0)
Version
3.1.3
URLs

View on R-Forge

Man pages

b02-0-ColorCoding-class
Class "ColorCoding"
b02-1-ColorCodedPair-class
Class "ColorCodedPair"
numnull
Class "numeric or NULL"
z01-matrixT
Multiple T Tests by Matrix Multiplication
z02-2-semanticColors
Pre-defined colors for microarray plots
z02-colorSchemes
Color Schemes for Images and Heat Maps

Files in this package

oompaBase/DESCRIPTION
oompaBase/NAMESPACE
oompaBase/NEWS
oompaBase/R
oompaBase/R/b00-classunions.R
oompaBase/R/b01-generics.R
oompaBase/R/b02-colorSchemes.R
oompaBase/R/b02-colors.R
oompaBase/R/b03-matrixOps.R
oompaBase/build
oompaBase/build/vignette.rds
oompaBase/inst
oompaBase/inst/doc
oompaBase/inst/doc/oompa.R
oompaBase/inst/doc/oompa.Rnw
oompaBase/inst/doc/oompa.pdf
oompaBase/man
oompaBase/man/b02-0-ColorCoding-class.Rd
oompaBase/man/b02-1-ColorCodedPair-class.Rd
oompaBase/man/numnull.Rd
oompaBase/man/z01-matrixT.Rd
oompaBase/man/z02-2-semanticColors.Rd
oompaBase/man/z02-colorSchemes.Rd
oompaBase/tests
oompaBase/tests/test02-colors.R
oompaBase/tests/test02-colors.Rout.save
oompaBase/tests/testMatrixOps.R
oompaBase/tests/testMatrixOps.Rout.save
oompaBase/vignettes
oompaBase/vignettes/oompa.Rnw