qtlDesign: Design of QTL experiments
Version 0.95

Tools for the design of QTL experiments

Browse man pages Browse package API and functions Browse package files

AuthorSaunak Sen, Jaya Satagopan, Karl Broman, and Gary Churchill
Date of publicationNone
MaintainerSaunak Sen <sen@biostat.ucsf.edu>
LicenseGPL (http://www.gnu.org/copyleft/gpl.html)
Version0.95
URL http://www.biostat.ucsf.edu/sen/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("qtlDesign", repos="http://R-Forge.R-project.org")

Man pages

ci.length: Calculating expected QTL confidence interval widths
error.var: Effect size, proportion variance explained, and error...
info: Information under null hypothesis of equal means
info2cost: Functions to calculate information-cost ratios
K1: Calculate scores for minimum moment abberations.
mma: Selective phenotyping with similarity measure 2
mma.level: MMA utility
optselection: Optimal selection fraction
optspacing: Optimal marker spacing
powercalc: Power, sample size, and detectable effect size calculations
qtlDesign-internal: qtlDesign-internal
thresh: Calculating thresholds and tail probabilities for genome...
utility: Utility functions
version.qtlDesign: Version of qtlDesign package

Functions

K1 Man page Source code
K12 Man page Source code
Kstat Man page Source code
ci.length Man page Source code
deflate Man page
deflate.bc Man page
deflate.f2 Man page
detectable Man page
detectable.bc Man page
detectable.f2 Man page
detectable.ri Man page
eff1 Man page Source code
error.var Man page
genetic.dist Man page
gmeans2effect Man page
info Man page
info.bc Man page
info.f2 Man page
info2cost Man page
info2cost.bc Man page
info2cost.f2 Man page
mma Man page Source code
mma.level Man page Source code
nu Man page Source code
nullinfo Man page
optselection Man page
optselection.bc Man page
optselection.f2 Man page
optspacing Man page
optspacing.bc Man page
optspacing.f2 Man page
powercalc Man page
powercalc.bc Man page
powercalc.f2 Man page
powercalc.ri Man page
prop.var Man page
qtlDesign-internal Man page
recomb Man page
samplesize Man page
samplesize.bc Man page
samplesize.f2 Man page
samplesize.ri Man page
tailprob Man page Source code
tau Man page Source code
thresh Man page Source code
version.qtlDesign Man page

Files

Changelog
R
R/info.R
R/optspacing.R
R/powercalc.R
R/version.qtlDesign.R
R/thresh.R
R/optselection.R
R/info2cost.R
R/genetic.dist.R
R/ci.length.R
R/selpheno.R
R/recomb.R
NAMESPACE
inst
inst/CITATION
DESCRIPTION
README
man
man/qtlDesign-internal.Rd
man/utility.Rd
man/thresh.Rd
man/optspacing.Rd
man/version.qtlDesign.Rd
man/optselection.Rd
man/mma.Rd
man/info.Rd
man/ci.length.Rd
man/mma.level.Rd
man/powercalc.Rd
man/K1.Rd
man/error.var.Rd
man/info2cost.Rd
qtlDesign documentation built on May 21, 2017, 12:14 a.m.