qtlDesign: Design of QTL experiments

Tools for the design of QTL experiments

Author
Saunak Sen, Jaya Satagopan, Karl Broman, and Gary Churchill
Date of publication
None
Maintainer
Saunak Sen <sen@biostat.ucsf.edu>
License
GPL (http://www.gnu.org/copyleft/gpl.html)
Version
0.95
URLs

View on R-Forge

Man pages

ci.length
Calculating expected QTL confidence interval widths
error.var
Effect size, proportion variance explained, and error...
info
Information under null hypothesis of equal means
info2cost
Functions to calculate information-cost ratios
K1
Calculate scores for minimum moment abberations.
mma
Selective phenotyping with similarity measure 2
mma.level
MMA utility
optselection
Optimal selection fraction
optspacing
Optimal marker spacing
powercalc
Power, sample size, and detectable effect size calculations
qtlDesign-internal
qtlDesign-internal
thresh
Calculating thresholds and tail probabilities for genome...
utility
Utility functions
version.qtlDesign
Version of qtlDesign package

Files in this package

qtlDesign
qtlDesign/Changelog
qtlDesign/R
qtlDesign/R/info.R
qtlDesign/R/optspacing.R
qtlDesign/R/powercalc.R
qtlDesign/R/version.qtlDesign.R
qtlDesign/R/thresh.R
qtlDesign/R/optselection.R
qtlDesign/R/info2cost.R
qtlDesign/R/genetic.dist.R
qtlDesign/R/ci.length.R
qtlDesign/R/selpheno.R
qtlDesign/R/recomb.R
qtlDesign/NAMESPACE
qtlDesign/inst
qtlDesign/inst/CITATION
qtlDesign/DESCRIPTION
qtlDesign/README
qtlDesign/man
qtlDesign/man/qtlDesign-internal.Rd
qtlDesign/man/utility.Rd
qtlDesign/man/thresh.Rd
qtlDesign/man/optspacing.Rd
qtlDesign/man/version.qtlDesign.Rd
qtlDesign/man/optselection.Rd
qtlDesign/man/mma.Rd
qtlDesign/man/info.Rd
qtlDesign/man/ci.length.Rd
qtlDesign/man/mma.level.Rd
qtlDesign/man/powercalc.Rd
qtlDesign/man/K1.Rd
qtlDesign/man/error.var.Rd
qtlDesign/man/info2cost.Rd