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rbrothers is a phylogenetic recombination detection package. Starting with aligned DNA sequences, rbrothers uses the Bayesian multiple changepoint model implemented in the JAVA package DualBrothers to create posterior tree probability plots. rbrothers automates the production of a reasonable set of candidate trees and provides trace plots and autocorrelation plots that allow the user to monitor the convergence and mixing of the Markov chain Monte Carlo algorithm.
Package details 


Author  Vladimir Minin, Jan Irvahn 
Date of publication  20150731 19:02:46 
Maintainer  Jan Irvahn <[email protected]> 
License  GPL3 
Version  0.01 
Package repository  View on RForge 
Installation 
Install the latest version of this package by entering the following in R:

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