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Functions for the detection of footprints of selection on dense SNP data using Extended Homozygosity Haplotype (EHH) based tests. The package includes computation of EHH, iHS (within population) and Rsb (across pairs of populations) statistics. Various plotting functions are also included to facilate vizualisation and interpretation of the results.
Package details |
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Author | Mathieu Gautier and Renaud Vitalis |
Maintainer | Mathieu Gautier <mathieu.gautier@supagro.inra.fr> |
License | GPL(>=2) |
Version | 1.0 |
Package repository | View on R-Forge |
Installation |
Install the latest version of this package by entering the following in R:
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