make.example.files: Creating example input files

Description Usage References See Also Examples

View source: R/data2haplohh.R


This function allows to copy in the working directory three different example files: bta12_cgu.hap (an haplotype input file in standrad format), bta12_hapguess_switch.out (an haplotype input file in fastphase output format) and map.inp (a SNP information input file). These files contains data for 280 haplotypes (originating from 140 individuals belonging to the Creole cattle breed from Guadeloupe) of 1,424 SNPs mapping to bovine chromosome 12 (BTA12) (see reference below).




Gautier, M. and Naves, M. (2011). Footprints of selection in the ancestral admixture of a New World Creole cattle breed. Molecular Ecology, 20, 3128–3143.

See Also




rehh documentation built on May 21, 2017, 1:09 a.m.
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