distribplot: Distribution of standardized iHS or Rsb values

In rehh: Searching for footprints of selection using Haplotype Homozygosity based tests

Description

Plot the observed distribution of standardized iHS or Rsb values together with the expected standard Gaussian distribution

Usage

distribplot(data,col=c("blue","red"),
main="iHS distribution",xlab="iHS")

Arguments

data	A vector of iHS or Rsb values.
col	A vector describing color of the Observed and expected Gaussian distribution
main	Character string for the plot legend
xlab	Character string for the X-axis legend

Value

The function returns a plot.

See Also

scan_hh,ihh2ihs,ies2rsb,ihsplot,rsbplot

Examples

data(wgscan.cgu) 
## results from a genome scan (44,057 SNPs) see ?wgscan.eut for details
val.ihs<-ihh2ihs(wgscan.cgu)$res.ihs[,3]
##standardize
distribplot(val.ihs,main="iHS (CGU population)")
dev.off()

rehh documentation built on May 2, 2019, 5:17 p.m.