Description Usage Arguments Value Examples
Contstructs a query with the given arguments and downloands the XML document created by that query. Unique IDs from linked-databases
1 | entrez_link(db, dbfrom, ...)
|
db |
character Name of the database to search for links (or use "all" to earch all NCBI databases |
dbfrom |
character Name of database from which the Id(s) orginate |
... |
character Additional terms to add to the request |
An elink object containing vectors of unique IDs the vectors names take the form [db_from]_[db_to]
file XMLInternalDocument xml file resulting from search,
parsed with xmlTreeParse
1 2 3 4 5 6 | ## Not run:
pubmed_search <- entrez_search(db = "pubmed", term = "10.1016/j.ympev.2010.07.013[doi]")
linked_data <- entrez_link(dbfrom = "pubmed", id = pubmed_search$ids, db = "all")
nucleotide_IDs <- linked_data$pubmed_nuccore
## End(Not run)
|
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