sdmo: Species Distribution Modelling (old version)

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sdm is an extendable framework to develop species distributions models using individual and community-based approaches, generate ensembles of models, evaluate the models, and predict species potential distributions in space and time.

Author
Babak Naimi, Miguel B. Araujo
Date of publication
2016-03-31 06:40:30
Maintainer
Babak Naimi <naimi.b@gmail.com>
License
GPL (>= 3)
Version
0.0-12
URLs

View on R-Forge

Man pages

ensemble
Ensemble Forecasting of SDMs
evaluates
evaluate for accuracy
gui
Graphical User Interface
names
Names of species
pca
Principle Component Analysis
predict
sdm model prediction
read.sdm
Read sdmModel from a file
roc
plot ROC curves
sdm
fit sdm models
sdmData
creating sdm Data object
sdmModel-class
sdm classes
sdmSetting
creating sdm Data object
write.sdm
Write an sdm Object to a file

Files in this package

sdmo/DESCRIPTION
sdmo/NAMESPACE
sdmo/R
sdmo/R/AAAClasses.R
sdmo/R/dataframe.R
sdmo/R/ensemble.R
sdmo/R/evaluates.R
sdmo/R/gui.R
sdmo/R/names.R
sdmo/R/pca.R
sdmo/R/plot.R
sdmo/R/predict.R
sdmo/R/sdm.R
sdmo/R/sdmData.R
sdmo/R/show.R
sdmo/R/thresholds.R
sdmo/R/write.R
sdmo/inst
sdmo/inst/external
sdmo/inst/external/preds.grd
sdmo/inst/external/preds.gri
sdmo/inst/external/species.dbf
sdmo/inst/external/species.shp
sdmo/inst/external/species.shx
sdmo/inst/shinyApps
sdmo/inst/shinyApps/sdm_base
sdmo/inst/shinyApps/sdm_base/server.R
sdmo/inst/shinyApps/sdm_base/ui.R
sdmo/inst/shinyApps/sdm_base/www
sdmo/inst/shinyApps/sdm_base/www/r_terminal_sdm.png
sdmo/man
sdmo/man/ensemble.Rd
sdmo/man/evaluates.Rd
sdmo/man/gui.Rd
sdmo/man/names.Rd
sdmo/man/pca.Rd
sdmo/man/predict.Rd
sdmo/man/read.sdm.Rd
sdmo/man/roc.Rd
sdmo/man/sdm.Rd
sdmo/man/sdmData.Rd
sdmo/man/sdmModel-class.Rd
sdmo/man/sdmSetting.Rd
sdmo/man/write.sdm.Rd