API for sdmo
Species Distribution Modelling (old version)

Global functions
.Extract Source code
.auc Source code
.brtFit Source code
.brtPredict Source code
.catReport Source code
.checkFactor Source code
.cmx Source code
.cor Source code
.createModelSetting Source code
.createMultipleSpecies Source code
.createSingleSpecies Source code
.createSpeciesDataList Source code
.create_multipleSpeciesData Source code
.create_singleSpeciesData Source code
.create_speciesDatalist Source code
.dataClean Source code
.df2list Source code
.dummy Source code
.eqFactLevel Source code
.evaluate Source code
.evaluate.cmx Source code
.excludeVector Source code
.exformula Source code
.factorFix Source code
.featExt Source code
.fixFormula Source code
.ftype_names Source code
.gamFit Source code
.gamPredict Source code
.genFormula Source code
.generateName Source code
.getBasicSetting Source code
.getEvalThresholds Source code
.getFormula Source code
.getGamFormula Source code
.getParams Source code
.getPerformance Source code
.getPerformanceStat Source code
.getPredictParams Source code
.getRunIndex Source code
.getSpeciesIndex Source code
.getTestIndex Source code
.getlevels Source code
.glmFit Source code
.glmPredict Source code
.int.to.numeric Source code
.interaction.generate Source code
.is.empty Source code
.isBinomial Source code
.isMethodAvailable Source code
.loadLib Source code
.mahal Source code
.methodFix Source code
.model.frame Source code
.occurrence Source code
.paramCheck Source code
.paramFix Source code
.plot.roc Source code
.pseudo Source code
.pseudo_df Source code
.raster2df Source code
.replicate Source code
.rfFit Source code
.rfPredict Source code
.roc Source code
.runScenarios Source code
.scenarioMatch Source code
.sdmFit Source code
.showScenarios Source code
.simpleFormula Source code
.singleORmulti Source code
.species2df Source code
.splitFormula Source code
.statFix Source code
.statFix2 Source code
.statFixname Source code
.strIdentical Source code
.svmFit Source code
.svmPredict Source code
.threshold Source code
.where Source code
CRSorNULL-class Man page
SpeciesDataList-class Man page
characterORmissing-class Man page
characterORnull-class Man page
cv.folds Source code
ensemble Man page
ensemble,sdmModel-method Man page
evaluates Man page
evaluates,vector,vector-method Man page
formulaORnull-class Man page
getRoc Man page
getRoc,vector,vector-method Man page
glmSetting Man page
glmSetting,ANY-method Man page
gui Man page
gui,ANY-method Man page
labels,speciesData-method Man page
listORnull-class Man page
multipleSpecies-class Man page
names Man page
names,SpeciesDataList-method Man page
names,multipleSpecies-method Man page
names,singleSpecies-method Man page
names,speciesData-method Man page
names<- Man page
names<-,speciesData,character-method Man page
names<-,speciesData-method Man page
pca Man page
pca,RasterStackBrick-method Man page
pca,multipleSpecies-method Man page
pca,singleSpecies-method Man page
predict Man page
predict,sdmModel-method Man page
read.sdm Man page
read.sdm,character-method Man page
roc Man page
roc,sdmModel-method Man page
sdm Man page
sdm,ANY,singleSpecies,sdmSettings-method Man page
sdm,formula,singleSpecies,character-method Man page
sdmData Man page
sdmData,SpatialPoints,Raster,ANY-method Man page
sdmData,SpatialPointsDataFrame,Raster,ANY-method Man page
sdmData,SpatialPointsDataFrame,missing,ANY-method Man page
sdmData,data.frame,missing,formula-method Man page Man page
sdmData,data.frame,missing,missing-method Man page
sdmEvaluate-class Man page Man page
sdmEvaluates-class Man page
sdmModel-class Man page
sdmSetting Man page
sdmSetting,formula,speciesData,character-method Man page
sdmSetting,missing,speciesData,character-method Man page
sdmSetting<- Man page
sdmSetting<-,ANY-method Man page
sdmSettings-class Man page
show,SpeciesDataList-method Man page
show,multipleSpecies-method Man page
show,sdmModel-method Man page
show,singleSpecies-method Man page
singleSpecies-class Man page
speciesData-class Man page
vectorORnull-class Man page
write.sdm Man page
write.sdm,sdmData,character-method Man page
write.sdm,sdmModel,character-method Man page
write.sdm,sdmSettings,character-method Man page
sdmo documentation built on May 2, 2019, 5:47 p.m.