simecolModels: Model collection for the simecol package
Version 0.3-1

simecolModels is an open collection of (mostly published) models implemented in the object oriented "simecol" style. The models are intended for reproducing and extending published work and for teaching purposes. The package is growing work in progress which may be eventually splitted in several thematic branches.

AuthorThomas Petzoldt, Karline Soetaert
Date of publication2013-09-15 20:40:02
MaintainerThomas Petzoldt <thomas.petzoldt@tu-dresden.de>
LicenseGPL (>= 2)
Version0.3-1
URL http://www.simecol.de/
Package repositoryView on R-Forge
InstallationInstall the latest version of this package by entering the following in R:
install.packages("simecolModels", repos="http://R-Forge.R-project.org")

Getting started

Package overview

Popular man pages

NPZD: An NPZD Model
NPZriver: Nutrient Phytoplankton Zooplankton (NPZ) Model in a River
OmexDia: Carbon, Nitrogen and Oxygen Diagenesis in Marine Sediments
OmexDiaDLL: Carbon, Nitrogen and Oxygen Diagenesis in Marine Sediments -...
simecolModels-package: Collection of Model Objects for the simecol-Package
slight: SALMO-Light: an absolutely simplistic lake model
StreamIron: Strontium injection experiment in Uvas Creek, a small stream...
See all...

All man pages Function index File listing

Man pages

algaepH: An Algal Model With pH Dynamics
aquaphy: a physiological model of unbalanced algal growth
daphnia_deb: Bioenergetic (Dynamic Energy Budget = DEB) Model of Daphnia
daphnia_deb_ibm: Bioenergetic Individual-Based Model of Daphnia
daphnia_ibm: Simple Individual-Based Model of Daphnia
daphnia_tefi: Daphnia Growth with Temperature and Food Interaction
dvm_phyto: Phytoplankton Growth Model with Pulsed Grazing
mcyst_batch: Microcystin Production Model (Batch Version)
mcyst_batch_mc: Microcystin Production Model (Batch Version for Monte Carlo...
mcyst_chemostat: Microcystin Production Model (Chemostat Version)
NPZD: An NPZD Model
NPZriver: Nutrient Phytoplankton Zooplankton (NPZ) Model in a River
OmexDia: Carbon, Nitrogen and Oxygen Diagenesis in Marine Sediments
OmexDiaDLL: Carbon, Nitrogen and Oxygen Diagenesis in Marine Sediments -...
SiDia: Silicate Diagenesis in Marine Sediments
simecolModels-package: Collection of Model Objects for the simecol-Package
slight: SALMO-Light: an absolutely simplistic lake model
StreamIron: Strontium injection experiment in Uvas Creek, a small stream...
timedepModel-class: Class "timedepModel"
UvasCreek: Strontium injection experiment in Uvas Creek, a small stream...
ZooScheldt: Fate of Marine Zooplankton in the Scheldt Estuary

Functions

Aquaphy Man page Source code
NPZD Man page Source code
NPZriver Man page Source code
OmexDia Man page Source code
OmexDiaDLL Man page Source code
SiDia Man page Source code
StreamIron Man page Source code
UvasCreek Man page Source code
ZooScheldt Man page Source code
algaepH Man page Source code
daphnia_deb Man page Source code
daphnia_deb_equations Man page
daphnia_deb_ibm Man page Source code
daphnia_deb_lifeequations Man page
daphnia_deb_phyto Man page Source code
daphnia_ibm Man page Source code
daphnia_tefi Man page Source code
dvm_phyto Man page Source code
epsilon Source code
mcyst_batch Man page
mcyst_batch_mc Man page Source code
mcyst_chemostat Man page
simecolModels Man page
simecolModels-package Man page
slight Man page
survive Source code
timedepModel Man page
timedepModel-class Man page
vonBertK Source code

Files

DESCRIPTION
NAMESPACE
R
R/NPZD.R
R/NPZriver.R
R/OmexDia.R
R/OmexDiaDLL.R
R/SiDia.R
R/StreamIron.R
R/UvasCreek.R
R/ZooScheldt.R
R/aaa_classes.R
R/algaepH.R
R/aquaphy.R
R/daphnia_deb.R
R/daphnia_deb_equations.R
R/daphnia_deb_ibm.R
R/daphnia_deb_lifeequations.R
R/daphnia_deb_phyto.R
R/daphnia_ibm.R
R/daphnia_tefi.R
R/dvmphyto.R
R/mcyst_batch.R
R/mcyst_batch_mc.R
R/mcyst_chemostat.R
R/slight.R
demo
demo/00Index
demo/deb_ibm.R
inst
inst/ToDo.txt
inst/doc
inst/doc/examples
inst/doc/examples/aaa_classes.R
inst/doc/examples/daphnia_deb.R
inst/doc/examples/daphnia_deb_equations.R
inst/doc/examples/daphnia_deb_ibm.R
inst/doc/examples/daphnia_deb_lifeequations.R
inst/doc/examples/daphnia_deb_phyto.R
inst/doc/examples/daphnia_ibm.R
inst/doc/examples/daphnia_tefi.R
inst/doc/examples/dvmphyto.R
inst/doc/examples/iteration.R
inst/doc/examples/mcyst_batch.R
inst/doc/examples/mcyst_batch_mc.R
inst/doc/examples/mcyst_chemostat.R
inst/doc/examples/observer.R
inst/doc/examples/slight.R
man
man/NPZD.Rd
man/NPZriver.Rd
man/OmexDia.Rd
man/OmexDiaDLL.Rd
man/SiDia.Rd
man/StreamIron.Rd
man/UvasCreek.Rd
man/ZooScheldt.Rd
man/algaepH.Rd
man/aquaphy.Rd
man/daphnia_deb.Rd
man/daphnia_deb_ibm.Rd
man/daphnia_ibm.Rd
man/daphnia_tefi.Rd
man/dvm_phyto.Rd
man/mcyst_batch.Rd
man/mcyst_batch_mc.Rd
man/mcyst_chemostat.Rd
man/simecolModels-package.Rd
man/slight.Rd
man/timedepModel-class.Rd
src
src/omexdia.f
simecolModels documentation built on May 21, 2017, 12:58 a.m.

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