spnModels: Example SPN models
In smfsb: Stochastic Modelling for Systems Biology

spnModels

R Documentation

Example SPN models

Description

Collection of example stochastic Petri net (SPN) models. Includes LV, a Lotka–Volterra model, ID, an immigration–death process, BD, a birth–death process, SIR, a simple SIR model, SEIR, an SEIR epidemic model, Dimer, a simple dimerisation kinetics model, and MM, a Michaelis–Menten enzyme kinetic model.

Usage

data(spnModels)

Format

Each model is a list, with components Pre, Post, and h. Some models also include an initial state, M. See gillespie and StepGillespie for further details, and examples of use.