sprof: Profiling, timing and optimisation utilities

Support utilities for profiling and dynamic code analysis.

Author
Günther Sawitzki
Date of publication
2014-06-30 16:17:53
Maintainer
Günther Sawitzki <gsawitzki@users.r-forge.r-project.org>
License
GPL-2 | GPL-3
Version
0.1-1
URLs

View on R-Forge

Man pages

adjacency
sprof to adjacency matix
asfactormodel
Convert to factor, like model
barplot_s
Sorted Bar Plots
edgedf
Expand adjacency information to an edge table
list.as.matrix
Convert list to matrix
nodepackage
Find a package that may contain a node
nodescloud
Nodescloud of nodes from profile data
nodesprofile
Run length matrix
nodesrunlength
Marginal information for run length from profile
plot_nodes
Plot profiling information on node level.
plot_profiles
Plot profiling information on profile level.
plot.sprof
plot for profiles
plot_stacks
Plot profiling information on stack level.
print_profiles
Print profile information
print.sprof
print for profiles
profiles_matrix
Extract a node incidence matrix from profile information.
readRprof
Read 'Rprof' Output files and Stack Logs
rkindex
Index, based on rank.
roots_sprof
Root nodes list for 'sprof'
rrle
Recursive run length encoding.
rrleb
Recursive run length encoding bottom up.
sampleRprof
Get a sample profile
shownodes
Show node information from a profile
sprof01lm
sprof sample data
sprof-package
sprof: Analysis of R profiles
stacksasfactor
Represent stacks as factor
stackstoadj
Stacks to adjacency matrix
str_prof
str for sprof objects
summary.sprof
Summary for profiles
summary_terminals
Tabulate leaf nodes
trimstacks
Trim 'sprof' stacks.
updateRprof
Update statistics and tables in a 'sprof' obejct
writeRprof
Write profile data

Files in this package

sprof/ChangeLog
sprof/DESCRIPTION
sprof/NAMESPACE
sprof/R
sprof/R/adjacency.R
sprof/R/asfactormodel.R
sprof/R/barplot_s.R
sprof/R/edgedf.R
sprof/R/list.as.matrix.R
sprof/R/nodepackage.R
sprof/R/nodescloud.R
sprof/R/nodesprofile.R
sprof/R/nodesrunlength.R
sprof/R/plot.sprof.R
sprof/R/print.sprof.R
sprof/R/profiles_matrix.R
sprof/R/readRprof.R
sprof/R/rkindex.R
sprof/R/roots_sprof.R
sprof/R/rrle.R
sprof/R/sampleRprof.R
sprof/R/shownodes.R
sprof/R/stacksasfactor.R
sprof/R/summary.sprof.R
sprof/R/trimstacks.R
sprof/R/updateRprof.R
sprof/data
sprof/data/sprof01lm.RData
sprof/demo
sprof/demo/00Index
sprof/demo/igraphFrRein.R
sprof/demo/igraphFrReingrid.R
sprof/demo/igraphKK.R
sprof/demo/igraphKK2.R
sprof/demo/igraphauto.R
sprof/demo/igraphcircle.R
sprof/demo/igraphgraphopt.R
sprof/demo/igraphlgl.R
sprof/demo/igraphrandom.R
sprof/demo/igraphsphere.R
sprof/demo/igraphspring.R
sprof/demo/igraphsvd.R
sprof/inst
sprof/inst/NEWS.Rd
sprof/inst/Rprof.out
sprof/inst/doc
sprof/inst/doc/sprofiling.Rnw
sprof/inst/doc/sprofiling.pdf
sprof/inst/extdata
sprof/inst/extdata/RprofsRegressionExpl01.out
sprof/inst/extdata/RprofsRegressionExpl03.out
sprof/man
sprof/man/adjacency.Rd
sprof/man/asfactormodel.Rd
sprof/man/barplot_s.Rd
sprof/man/edgedf.Rd
sprof/man/figures
sprof/man/figures/plotsprof.pdf
sprof/man/figures/plotsprof.png
sprof/man/figures/rpoplotnodes.pdf
sprof/man/figures/rpoplotnodes.png
sprof/man/figures/snodes01cloudcol.pdf
sprof/man/figures/snodes01cloudcol.png
sprof/man/figures/sprofiling-Rdbarplots.pdf
sprof/man/figures/sprofiling-Rdbarplots.png
sprof/man/figures/sprofiling-Rdplotnodes01.pdf
sprof/man/figures/sprofiling-Rdplotnodes01.png
sprof/man/figures/sprofiling-Rdplotsprof.pdf
sprof/man/figures/sprofiling-Rdplotsprof.png
sprof/man/figures/sprofiling-Rdrpoplotnodes.pdf
sprof/man/figures/sprofiling-Rdrpoplotnodes.png
sprof/man/figures/sprofiling-Rdrpoplotprofiles.pdf
sprof/man/figures/sprofiling-Rdrpoplotprofiles.png
sprof/man/figures/sprofiling-Rdrpoplotstacks.pdf
sprof/man/figures/sprofiling-Rdrpoplotstacks.png
sprof/man/figures/sprofiling-Rdshownodes02.pdf
sprof/man/figures/sprofiling-Rdshownodes02.png
sprof/man/figures/sprofiling-plotsprof.pdf
sprof/man/figures/sprofiling-plotsprof.png
sprof/man/figures/sprofiling-sREplotnodes04col.pdf
sprof/man/figures/sprofiling-shownodes02.pdf
sprof/man/figures/sprofiling-shownodes02.png
sprof/man/figures/sprofiling-sprof01collink.pdf
sprof/man/list.as.matrix.Rd
sprof/man/nodepackage.Rd
sprof/man/nodescloud.Rd
sprof/man/nodesprofile.Rd
sprof/man/nodesrunlength.Rd
sprof/man/plot.sprof.Rd
sprof/man/plot_nodes.Rd
sprof/man/plot_profiles.Rd
sprof/man/plot_stacks.Rd
sprof/man/print.sprof.Rd
sprof/man/print_profiles.Rd
sprof/man/profiles_matrix.Rd
sprof/man/readRprof.Rd
sprof/man/rkindex.Rd
sprof/man/roots_sprof.Rd
sprof/man/rrle.Rd
sprof/man/rrleb.Rd
sprof/man/sampleRprof.Rd
sprof/man/shownodes.Rd
sprof/man/sprof-package.Rd
sprof/man/sprof01lm.Rd
sprof/man/stacksasfactor.Rd
sprof/man/stackstoadj.Rd
sprof/man/str_prof.Rd
sprof/man/summary.sprof.Rd
sprof/man/summary_terminals.Rd
sprof/man/trimstacks.Rd
sprof/man/updateRprof.Rd
sprof/man/writeRprof.Rd
sprof/tests
sprof/tests/barplot_s.R
sprof/tests/list.as.matrix.R
sprof/tests/rkindex.R
sprof/tests/rrle.R
sprof/vignettes
sprof/vignettes/RprofsRegressionExpl01.out
sprof/vignettes/RprofsRegressionExpl03.out
sprof/vignettes/Rprofsr01.out
sprof/vignettes/sprofiling.Rnw
sprof/vignettes/sprofiling.pdf