kinrespGrowthphaseExperiment: kinrespGrowthphaseExperiment

Description Usage Arguments Details Value Author(s) See Also

View source: R/growthphaseExperiment.R

Description

Confining the unlimited growth phase for several replicates.

Usage

1
2
kinrespGrowthphaseExperiment(rde, ..., stopOnReplicateError = FALSE, 
    isVerbose = TRUE)

Arguments

rde

data.frame with columns suite, experiment, replicate, resp and time

...

further arguments to kinrespGrowthphaseReplicate

stopOnReplicateError

By default replicates where not fit is obtained are ignored.

isVerbose

set to FALSE to suppress messages

Details

Functions for Confining the time series to the unlimited growth phase
  • Calculating fits and statistics: this method and kinrespGrowthphaseReplicate

  • Extracting the records of the unlimited growth phase: getUnlimitedGrowthData.kinresp and getUnlimitedGrowthData.kinrespList

  • Plotting diagnostic plots: plotKinrespDiagnostics.kinresp and plotKinrespDiagnostics.kinrespList

Value

list with components

n

data.frame with columns [suite, experiment, replicate], their combination named "ser" and entry n from result of kinrespGrowthphaseReplicate for each replicate

resRep

list of results of kinrespGrowthphaseReplicate for each replicate

errors

list of error messages for replicates where fit failed.

Author(s)

Thomas Wutzler <thomas.wutzler@web.de>

See Also

twKinresp


twKinresp documentation built on May 2, 2019, 4:47 p.m.