vGWAS: Variance Heterogeneity Genome-Wide Association Study

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The package provides models and tests for variance heterogeneity genome-wide association study (vGWAS).

Author
Xia Shen
Date of publication
2015-01-08 14:03:53
Maintainer
Xia Shen <xia.shen@ki.se>
License
GPL
Version
2015.01.08

View on R-Forge

Man pages

brown.forsythe.test
Brown-Forsythe's Test of Equality of Variances
chr
Chromosome Indices for The Markers of The Simulated Data
geno
The Marker Genotypes of The Simulated Data
map
Map Positions for The Markers of The Simulated Data
pheno
Phenotypic Values for The Markers of The Simulated Data
plot.vGWAS
Variance GWA Manhattan Plot
summary.vGWAS
Variance GWA Summary
vGWAS
Variance Genome-wide Association
vGWAS.gc
Genomic Control for vGWAS
vGWAS-package
Variance Heterogeneity Genome-wide Association Study
vGWAS.variance
Calculating Variance Explained by A Single Marker

Files in this package

vGWAS/ChangeLog
vGWAS/DESCRIPTION
vGWAS/NAMESPACE
vGWAS/R
vGWAS/R/vGWAS_Shen.R
vGWAS/build
vGWAS/build/vignette.rds
vGWAS/data
vGWAS/data/chr.rda
vGWAS/data/geno.rda
vGWAS/data/map.rda
vGWAS/data/pheno.rda
vGWAS/inst
vGWAS/inst/CITATION
vGWAS/inst/doc
vGWAS/inst/doc/vGWAS.Rnw
vGWAS/inst/doc/vGWAS.pdf
vGWAS/man
vGWAS/man/brown.forsythe.test.Rd
vGWAS/man/chr.Rd
vGWAS/man/geno.Rd
vGWAS/man/map.Rd
vGWAS/man/pheno.Rd
vGWAS/man/plot.vGWAS.Rd
vGWAS/man/summary.vGWAS.Rd
vGWAS/man/vGWAS-package.Rd
vGWAS/man/vGWAS.Rd
vGWAS/man/vGWAS.gc.Rd
vGWAS/man/vGWAS.variance.Rd
vGWAS/vignettes
vGWAS/vignettes/pdfpages.dtx
vGWAS/vignettes/vGWAS-tutorial.pdf
vGWAS/vignettes/vGWAS.Rnw