getRefflat: Get the refflat table from ucsc for the given genome

Description Usage Arguments Value Author(s) References See Also Examples

Description

Fetches the refflat table from ucsc, stores in temp dir and then gunzips it and reads it in.

Usage

1
getRefflat(genome = "hg17")

Arguments

genome

The genome code from ucsc, like 'hg16', 'mm6', etc.

Value

A data frame mirroring the UCSC table structure.

Author(s)

Sean Davis <sdavis2@mail.nih.gov>

References

http://genome.ucsc.edu

See Also

findClosestGene

Examples

1
rf <- getRefflat('hg17')

ACME documentation built on May 31, 2017, 2:53 p.m.

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