GSE114922.fpkm: Example gene expression dataset
In ASpediaFI: ASpedia-FI: Functional Interaction Analysis of Alternative Splicing Events
Description
Usage
Format
References
Examples
Description
A matrix containing gene expression values. We downloaded RNA-Seq reads of
82 MDS patients from GEO database (GSE114922), aligned with STAR, and
obtained FPKM values using RSEM.
Usage
1
Format
An object of class matrix with 6275 rows and 40 columns.
References
Pellagatti, A. et al. (2018). Impact of spliceosome mutations on
RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical
associations. Blood, 132.
Examples
1
ASpediaFI documentation built on Nov. 8, 2020, 8:13 p.m.
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Description Usage Format References Examples
Description
A matrix containing gene expression values. We downloaded RNA-Seq reads of 82 MDS patients from GEO database (GSE114922), aligned with STAR, and obtained FPKM values using RSEM.
Usage
1 |
Format
An object of class matrix with 6275 rows and 40 columns.
References
Pellagatti, A. et al. (2018). Impact of spliceosome mutations on RNA splicing in myelodysplasia: dysregulated genes/pathways and clinical associations. Blood, 132.
Examples
1 |
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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