DetectedAI-class: DetectedAI class

In AllelicImbalance: Investigates Allele Specific Expression

Description

Object that holds results from AI detection.

Usage

referenceFrequency(x, ...)

## S4 method for signature 'DetectedAI'
referenceFrequency(x, return.class = "array")

thresholdFrequency(x, ...)

## S4 method for signature 'DetectedAI'
thresholdFrequency(x, return.class = "array")

thresholdCountSample(x, ...)

## S4 method for signature 'DetectedAI'
thresholdCountSample(x, return.class = "array")

thresholdDeltaFrequency(x, ...)

## S4 method for signature 'DetectedAI'
thresholdDeltaFrequency(x, return.class = "array")

thresholdPvalue(x, ...)

## S4 method for signature 'DetectedAI'
thresholdPvalue(x, return.class = "array")

Arguments

x	ASEset object or list of ASEsets
...	pass arguments to internal functions
return.class	type of class returned eg. "list or ""array".

Details

The DetectedAI-class contains

Author(s)

Jesper R. Gadin, Lasse Folkersen

Examples

data(ASEset)
a <- ASEset
dai <- detectAI(a)

#summary(gba)
#write.tables(dai)

AllelicImbalance documentation built on Nov. 8, 2020, 6:52 p.m.