Anaquin: Statistical analysis of sequins

The project is intended to support the use of sequins (synthetic sequencing spike-in controls) owned and made available by the Garvan Institute of Medical Research. The goal is to provide a standard open source library for quantitative analysis, modelling and visualization of spike-in controls.

AuthorTed Wong
Date of publicationNone
MaintainerTed Wong <t.wong@garvan.org.au>
LicenseBSD_3_clause + file LICENSE
Version1.0.0
www.sequin.xyz

View on Bioconductor

Functions

analysis Man page
analysis,AnaquinData-method Man page
AnaquinData Man page
input Man page
input,AnaquinData-method Man page
label Man page
label,AnaquinData-method Man page
measured Man page
measured,AnaquinData-method Man page
mixtureA Man page
mixtureB Man page
mixtureF Man page
plotLinear Man page
plotLODR Man page
plotLogistic Man page
plotROC Man page
pval Man page
pval,AnaquinData-method Man page
qval Man page
qval,AnaquinData-method Man page
ratio Man page
ratio,AnaquinData-method Man page
RnaQuin.gen2iso Man page
RnaQuin.gen2iso,AnaquinData-method Man page
RnaQuin.genes Man page
RnaQuin.genes,AnaquinData-method Man page
RnaQuin.isoforms Man page
RnaQuin.isoforms,AnaquinData-method Man page
score Man page
score,AnaquinData-method Man page
seqs Man page
seqs,AnaquinData-method Man page
std Man page
std,AnaquinData-method Man page
UserGuideData_5.4.5.1 Man page
UserGuideData_5.4.6.3 Man page
UserGuideData_5.6.3 Man page

Files

Anaquin/DESCRIPTION
Anaquin/LICENSE
Anaquin/NAMESPACE
Anaquin/R
Anaquin/R/LOQ.R Anaquin/R/RnaQuin.R Anaquin/R/anaquin.R Anaquin/R/graphics.R Anaquin/R/plotLODR.R Anaquin/R/plotLinear.R Anaquin/R/plotLogistic.R Anaquin/R/plotROC.R
Anaquin/README.md
Anaquin/build
Anaquin/build/vignette.rds
Anaquin/data
Anaquin/data/UserGuideData_5.4.5.1.rda
Anaquin/data/UserGuideData_5.4.6.3.rda
Anaquin/data/UserGuideData_5.6.3.rda
Anaquin/data/mixtureA.rda
Anaquin/data/mixtureB.rda
Anaquin/data/mixtureF.rda
Anaquin/inst
Anaquin/inst/CITATION
Anaquin/inst/NEWS
Anaquin/inst/doc
Anaquin/inst/doc/Anaquin.R
Anaquin/inst/doc/Anaquin.Rmd
Anaquin/inst/doc/Anaquin.pdf
Anaquin/man
Anaquin/man/AnaquinData.Rd Anaquin/man/RnaQuin.gen2iso.Rd Anaquin/man/RnaQuin.genes.Rd Anaquin/man/RnaQuin.isoforms.Rd Anaquin/man/UserGuideData_5.4.5.1.Rd Anaquin/man/UserGuideData_5.4.6.3.Rd Anaquin/man/UserGuideData_5.6.3.Rd Anaquin/man/analysis.Rd Anaquin/man/input.Rd Anaquin/man/label.Rd Anaquin/man/measured.Rd Anaquin/man/mixtureA.Rd Anaquin/man/mixtureB.Rd Anaquin/man/mixtureF.Rd Anaquin/man/plotLODR.Rd Anaquin/man/plotLinear.Rd Anaquin/man/plotLogistic.Rd Anaquin/man/plotROC.Rd Anaquin/man/pval.Rd Anaquin/man/qval.Rd Anaquin/man/ratio.Rd Anaquin/man/score.Rd Anaquin/man/seqs.Rd Anaquin/man/std.Rd
Anaquin/tests
Anaquin/tests/tAnaquin.R
Anaquin/tests/tPlotLODR.R
Anaquin/tests/tPlotLinear.R
Anaquin/tests/tPlotLogistic.R
Anaquin/tests/tPlotROC.R
Anaquin/tests/tRnaQuin.R
Anaquin/vignettes
Anaquin/vignettes/Anaquin.Rmd

Questions? Problems? Suggestions? or email at ian@mutexlabs.com.

Please suggest features or report bugs with the GitHub issue tracker.

All documentation is copyright its authors; we didn't write any of that.