BCRANKmatch-class: Class "BCRANKmatch"
In BCRANK: Predicting binding site consensus from ranked DNA sequences

Holds the bcrank score for one IUPAC consensus sequence. Several objects of this class are collected in a BCRANKsearch-class object

Objects are not intended to be created directly but as a result from running bcrank.

consensus:: consensus sequence in IUPAC coding
bcrankScore:: bcrank score for the consensus
matchVec:: vector with 0's (no match) and 1's (match) of same length as the ranked DNA sequences

consensus: signature(object = "BCRANKmatch"): Returns the consensus sequence.
bcrankScore: signature(object = "BCRANKmatch"): Returns the bcrank score.
matchVector: signature(object = "BCRANKmatch"): Returns a vector with 0's (no match) and 1's (match) of same length and order as the ranked DNA sequences.

BCRANK documentation built on Nov. 8, 2020, 8:21 p.m.