API for BatchQC
Batch Effects Quality Control Software
| Global functions | |
|---|---|
| BatchQCout-class | Man page |
| Beta.NA | Source code |
| BinToDec | Source code |
| aprior | Source code |
| batchEffectPvalue | Source code |
| batchQC | Man page Source code |
| batchQC_analyze | Man page Source code |
| batchQC_condition_adjusted | Man page |
| batchQC_filter_genes | Man page |
| batchQC_fsva_adjusted | Man page Source code |
| batchQC_num.sv | Man page Source code |
| batchQC_psva | Source code |
| batchQC_shapeVariation | Man page Source code |
| batchQC_sva | Man page Source code |
| batchQC_svregress_adjusted | Man page Source code |
| batch_indicator | Man page |
| batchqc_circosplot | Man page Source code |
| batchqc_correlation | Man page Source code |
| batchqc_corscatter | Man page Source code |
| batchqc_explained_variation | Man page Source code |
| batchqc_f.pvalue | Source code |
| batchqc_heatmap | Man page Source code |
| batchqc_pc_explained_variation | Man page |
| batchqc_pca | Man page Source code |
| batchqc_pca_svd | Man page Source code |
| batchtest | Man page Source code |
| bprior | Source code |
| combatPlot | Man page Source code |
| delta_f.pvalue | Source code |
| example_batchqc_data | Man page |
| fitMoments | Source code |
| getShinyInput | Man page Source code |
| getShinyInputCombat | Man page Source code |
| getShinyInputOrig | Man page Source code |
| getShinyInputSVA | Man page Source code |
| getShinyInputSVAf | Man page Source code |
| getShinyInputSVAr | Man page Source code |
| gls.series.C | Source code |
| gnormalize | Man page Source code |
| hcbHeatmap | Source code |
| lmFitC | Man page Source code |
| log2CPM | Man page Source code |
| makeSVD | Man page Source code |
| overallPvalue | Source code |
| pcRes | Man page Source code |
| plotPC | Man page Source code |
| plot_genewise_moments | Man page |
| plot_samplewise_moments | Man page |
| protein_data | Man page |
| protein_example_data | Man page |
| protein_sample_info | Man page |
| rnaseq_sim | Man page Source code |
| setShinyInput | Man page Source code |
| setShinyInputCombat | Man page Source code |
| setShinyInputOrig | Man page Source code |
| setShinyInputSVA | Man page Source code |
| setShinyInputSVAf | Man page Source code |
| setShinyInputSVAr | Man page Source code |
| signature_data | Man page |
