kang_DNArepair: list of 151 genes annotated as DNA repair pathway members
In BiocOncoTK: Bioconductor components for general cancer genomics
Description
Usage
Format
Note
Source
Description
list of 151 genes annotated as DNA repair pathway members
Usage
1
Format
named list
Note
The zipped PDF was read using pdftools::pdf_text and then
manually organized. All gene symbols present in curatedTCGAData
RNASeq2GeneNorm rownames. The list elements are
ATM, BER, FA.HR, MMR, NER, NHEJ, OTHER, TLS, RECQ, and XLR.
These denote, respectively, ataxia-telangiectasia-mutated,
base excision repair, Fanconi anemia/homologous recombination,
mismatch repair, nucleotide excision repair,
non-homologous end joining, other, translesion synthesis,
recQ helicase pathway, and cross-link repair.
Source
https://academic.oup.com/jnci/article/104/9/670/872781#supplementary-data
BiocOncoTK documentation built on Nov. 8, 2020, 6:03 p.m.
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Description Usage Format Note Source
Description
list of 151 genes annotated as DNA repair pathway members
Usage
1 |
Format
named list
Note
The zipped PDF was read using pdftools::pdf_text and then manually organized. All gene symbols present in curatedTCGAData RNASeq2GeneNorm rownames. The list elements are ATM, BER, FA.HR, MMR, NER, NHEJ, OTHER, TLS, RECQ, and XLR. These denote, respectively, ataxia-telangiectasia-mutated, base excision repair, Fanconi anemia/homologous recombination, mismatch repair, nucleotide excision repair, non-homologous end joining, other, translesion synthesis, recQ helicase pathway, and cross-link repair.
Source
https://academic.oup.com/jnci/article/104/9/670/872781#supplementary-data
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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