getExampleVector: Get an example vector for specified genes

In BrainSABER: Brain Span Atlas in Biobase Expressionset R toolset

Description

This function returns a named example vector of gene expression values for the specified genes, taken from the 1st row of AIBSARNA, for use in demonstrating getSimScores.

Usage

getExampleVector(genes, AIBSARNA = NULL)

Arguments

genes	a character vector of HGNC-compliant gene names
AIBSARNA	an instance of the AIBSARNA dataset, built using the buildAIBSARNA() function

Value

a named character vector of gene-expression values

Examples

AIBSARNA <- buildAIBSARNA(mini = TRUE)
myGenes <- c("TSPAN6", "DPM1", "C1orf112")
myExampleVector <- getExampleVector(myGenes, AIBSARNA)

BrainSABER documentation built on Nov. 8, 2020, 7:28 p.m.