BufferedMatrixMethods: Microarray Data related methods that utlize BufferedMatrix objects
Version 1.40.0

Microarray analysis methods that use BufferedMatrix objects

AuthorB. M. Bolstad <bmb@bmbolstad.com>
Bioconductor views Infrastructure
Date of publicationNone
MaintainerB. M. Bolstad <bmb@bmbolstad.com>
LicenseGPL (>= 2)
Version1.40.0
URL https://github.bom/bmbolstad/BufferedMatrixMethods
Package repositoryView on Bioconductor
InstallationInstall the latest version of this package by entering the following in R:
source("https://bioconductor.org/biocLite.R")
biocLite("BufferedMatrixMethods")

Popular man pages

BM_affyDataInput: Read CEL file data into PM or MM BufferedMatrix
BM_justRMA: Use BufferedMatrix objects to facilitate RMA computation with...
BM_readcelfiles: Read CEL file data into PM or MM BufferedMatrix
rmapreprocess.bufferedmatrix: RMA preprocessing functions that work on BufferedMatrix...
See all...

All man pages Function index File listing

Man pages

BM_affyDataInput: Read CEL file data into PM or MM BufferedMatrix
BM_justRMA: Use BufferedMatrix objects to facilitate RMA computation with...
BM_readcelfiles: Read CEL file data into PM or MM BufferedMatrix
rmapreprocess.bufferedmatrix: RMA preprocessing functions that work on BufferedMatrix...

Functions

BufferedMatrix.bg.correct.normalize.quantiles Man page Source code
BufferedMatrix.justRMA Man page Source code
BufferedMatrix.read.celfiles Man page Source code
BufferedMatrix.read.probematrix Man page Source code
First.lib Source code
GetCelNames Source code
bg.correct.BufferedMatrix Man page Source code
checkValidFilenames Source code
list.celfiles Source code
median.polish.summarize Man page
median.polish.summarize,BufferedMatrix-method Man page
normalize.BufferedMatrix.quantiles Man page Source code

Files

DESCRIPTION
NAMESPACE
R
R/BM_Preprocess.R
R/BM_affyDataInput.R
R/BM_justRMA.R
R/init_fns.R
man
man/BM_affyDataInput.Rd
man/BM_justRMA.Rd
man/BM_readcelfiles.Rd
man/rmapreprocess.bufferedmatrix.Rd
src
src/init_package.c
src/preprocess_bm.c
BufferedMatrixMethods documentation built on May 20, 2017, 9:12 p.m.