calcIsotopes-methods: Calculate isotope distance matrix from xsAnnotate object
In CAMERA: Collection of annotation related methods for mass spectrometry data
Description
Arguments
Value
Methods
Author(s)
See Also
Description
Processing an xsAnnotate object with annotated isotopes (findIsotopes). It return a weighted edge list as distance matrix between peaks
according to the isotope annotation. The edge value for recognized isotopes is 1 for all cases. The list can be used as input for calcPC.
Arguments
object
xsAnnotate object
Value
A matrix with 4 columns:
x
peak index
y
peak index
cor
edge value, always 1
ps
pseudospectrum index, which contains x and y
Methods
- object = "xsAnnotate"
-
calcIsotopes(object)
Author(s)
Carsten Kuhl, ckuhl@ipb-halle.de
See Also
CAMERA documentation built on Nov. 8, 2020, 4:59 p.m.
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Description Arguments Value Methods Author(s) See Also
Description
Processing an xsAnnotate object with annotated isotopes (findIsotopes). It return a weighted edge list as distance matrix between peaks
according to the isotope annotation. The edge value for recognized isotopes is 1 for all cases. The list can be used as input for calcPC.
Arguments
object |
|
Value
A matrix with 4 columns:
x |
peak index |
y |
peak index |
cor |
edge value, always 1 |
ps |
pseudospectrum index, which contains x and y |
Methods
- object = "xsAnnotate"
-
calcIsotopes(object)
Author(s)
Carsten Kuhl, ckuhl@ipb-halle.de
See Also
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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