Files in CHETAH
Fast and accurate scRNA-seq cell type identification
README.md
CHETAH documentation built on Nov. 8, 2020, 8:02 p.m.
NEWS
NAMESPACE
DESCRIPTION
LICENSE
build/vignette.rds
data/input_mel.rda
data/headneck_ref.rda
R/Utils_CHETAH.R
R/data.R
vignettes/CHETAH_introduction.Rmd
vignettes/Shiny_bar.png
vignettes/header.html
man/Classify.Rd
man/CHETAHshiny.Rd
man/ClassifyReference.Rd
man/PlotTree.Rd
man/PlotTSNE.Rd
man/RenameBelowNode.Rd
man/input_mel.Rd
man/PlotCHETAH.Rd
man/headneck_ref.Rd
man/CorrelateReference.Rd
man/CHETAHclassifier.Rd
tests/testthat.R
tests/testthat/test_classifier.R
tests/testthat/test_plots.R
tests/figs/deps.txt
tests/figs/plots/plot-intermediate-types.svg
tests/figs/plots/plot-standard-chetah.svg
tests/figs/plots/plot-rename-below.svg
tests/figs/plots/plot-tree-only.svg
tests/figs/plots/plot-reclassify.svg
inst/CITATION
inst/doc/CHETAH_introduction.Rmd
inst/doc/CHETAH_introduction.R
inst/doc/CHETAH_introduction.html
inst/shinyApp/App/ui.R
inst/shinyApp/App/server.R
inst/shinyApp/App/www/Shiny_bar.png
