headneck_ref: A SingleCellExperiment with celltypes in the "celltypes"...
In CHETAH: Fast and accurate scRNA-seq cell type identification
Description
Usage
Format
Source
References
Description
A SingleCellExperiment with celltypes in the "celltypes" colData.
A subset of the Head-Neck data from Puram et al. (2017) Cancer Cell.
Usage
1
Format
A list of expression matrices. Each object is named as the cell type of the cells in that matrix.
Each matrix has the cell (names) in the colums and the genes in the rows.
Source
for the original data: GEO
References
Puram et al. (2017) Cancer Cell 171:1611-1624
CHETAH documentation built on Nov. 8, 2020, 8:02 p.m.
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Description Usage Format Source References
Description
A SingleCellExperiment with celltypes in the "celltypes" colData. A subset of the Head-Neck data from Puram et al. (2017) Cancer Cell.
Usage
1 |
Format
A list of expression matrices. Each object is named as the cell type of the cells in that matrix. Each matrix has the cell (names) in the colums and the genes in the rows.
Source
for the original data: GEO
References
Puram et al. (2017) Cancer Cell 171:1611-1624
R Package Documentation
Browse R Packages
We want your feedback!
Note that we can't provide technical support on individual packages. You should contact the package authors for that.
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