Files in CHETAH

Fast and accurate scRNA-seq cell type identification

README.md

NEWS

NAMESPACE

DESCRIPTION

LICENSE

build/vignette.rds

data/input_mel.rda

data/headneck_ref.rda

R/Utils_CHETAH.R R/data.R vignettes/CHETAH_introduction.Rmd

vignettes/Shiny_bar.png

vignettes/header.html

man/Classify.Rd man/CHETAHshiny.Rd man/ClassifyReference.Rd man/PlotTree.Rd man/PlotTSNE.Rd man/RenameBelowNode.Rd man/input_mel.Rd man/PlotCHETAH.Rd man/headneck_ref.Rd man/CorrelateReference.Rd man/CHETAHclassifier.Rd tests/testthat.R tests/testthat/test_classifier.R tests/testthat/test_plots.R

tests/figs/deps.txt

tests/figs/plots/plot-intermediate-types.svg

tests/figs/plots/plot-standard-chetah.svg

tests/figs/plots/plot-rename-below.svg

tests/figs/plots/plot-tree-only.svg

tests/figs/plots/plot-reclassify.svg

inst/CITATION

inst/doc/CHETAH_introduction.Rmd inst/doc/CHETAH_introduction.R

inst/doc/CHETAH_introduction.html

inst/shinyApp/App/ui.R inst/shinyApp/App/server.R

inst/shinyApp/App/www/Shiny_bar.png

CHETAH documentation built on Nov. 8, 2020, 8:02 p.m.