load_ctd_gene: Function to load the '.tsv.gz' file for genes

In CTDquerier: Package for CTDbase data query, visualization and downstream analysis

Description

This function works in pair with download_ctd_genes. This function loads into the R session the downloaded "CTD_genes.tsv.gz" file.

Usage

load_ctd_gene()

Details

The field included in the file (CTD_genes.tsv.gz) are:

1. GeneSymbol

2. GeneName

3. GeneID (NCBI Gene identifier)

4. AltGeneIDs (alternative NCBI Gene identifiers; '|'-delimited list)

5. Synonyms ('|'-delimited list)

6. BioGRIDIDs ('|'-delimited list)

7. PharmGKBIDs ('|'-delimited list)

8. UniprotIDs ('|'-delimited list)

Value

A data.frame with the content of the file "CTD_genes.tsv.gz"

Examples

download_ctd_genes()
fdl <- load_ctd_gene()
dim( fdl )

CTDquerier documentation built on Oct. 31, 2019, 2:57 a.m.