Man pages for CVE
Cancer Variant Explorer

crcCaseExample Oncotator output for the single-patient colorectal...
genes_WGCNATop 5000 most variant genes in TCGA RNAseq data
get.oncotator.annoOpen Cancer Variant Explorer (CVE) Shiny app
GS_lscoreLymphocyte score gene significance (GS)
GS_pmetPrimary vs metastasis gene significance (GS)
GS_survivalSurvival gene significance (GS)
GS_UVUV signature gene significance (GS)
GS_VemVemurafenib resistance gene significance (GS)
label_orderLabel order of co-expression modules
melanomaCaseExample Oncotator output for the melanoma cohort study...
METree_GOGene tree of co-expression network
MMModule membership
modulesModule assignment of top 5000 most variant genes in TCGA...
MS_lscoreLymphocyte score module significance (MS)
MS_lscore_barLymphocyte score module significance scaled for barplot
MS_pmetPrimary vs metastasis module significance (MS)
MS_pmet_barPrimary vs metastasis module significance scaled for barplot
MS_survivalSurvival module significance (MS)
MS_survival_barSurvival module significance scaled for barplot
MS_UVUV signature module significance (MS)
MS_UV_barUV signature module significance scaled for barplot
MS_vemVemurafenib resistance module significance (MS)
MS_Vem_barVemurafenib resistance module significance scaled for barplot
openCVEOpen Cancer Variant Explorer (CVE) Shiny app
CVE documentation built on May 2, 2018, 2:04 a.m.